Query= MSMg01no150_f06.b1 MSMg01no150_f06.b1 CHROMAT_FILE:
MSMg01no150_f06.b1 PHD_FILE: MSMg01no150_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:51 2005
(260 letters)
>mm_chr1_60644485_60645143
Length = 659
Score = 460 bits (238), Expect = e-134
Identities = 253/258 (98%), Gaps = 1/258 (0%)
Strand = Plus / Plus
Query: 1 gtttttctgaaagtttagactcagtgtcagcatagcataacacttactatttatgactca 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 gtttttctgaaagtttagactcagtgtcagtatagcataacacttactatttatgactca 260
Query: 61 tttactattcatttataagccaaatggccttctaagaatggaaaacagaaatgtggtact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttactattcatttataagccaaatggccttctaagaatggaaaacagaaatgtggtact 320
Query: 121 gggaactgaacctgggtcatagcttggcataggtccaccctccaagccctatccccagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaactgaacctgggtcatagcttggcataggtccaccctccaagccctatccccagcc 380
Query: 181 ctctttctgctatttgtatctaggctctcatttacccatgctggccttgaatttactctc 240
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctttctgctatttg-agccaggctctcatttacccatgctggccttgaatttactctc 439
Query: 241 ttgtccttgaatttgtga 258
||| ||||||||||||||
Sbjct: 440 ttggccttgaatttgtga 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 659
Length adjustment: 9
Effective length of query: 251
Effective length of database: 650
Effective search space: 163150
Effective search space used: 163150
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no150_f06.g1 MSMg01no150_f06.g1 CHROMAT_FILE:
MSMg01no150_f06.g1 PHD_FILE: MSMg01no150_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:51 2005
(249 letters)
>mm_chr1_60739061_60739708
Length = 648
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 attcctcttcatacaaatgaagaatccccagcagcctggccagtgatgtacaacacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 attcctcttcatacaaatgaagaatccccagcagcctggccagtgatgtacaacacacac 389
Query: 61 caatagcccctactctcgcccctcaaaggtttaaatagcctttgttctcccccaataaat 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 388 caatagcccctactctcgcccctcaaaggtttaaatagcctttgttct-ccccaaaaaat 330
Query: 121 gaaaccagttctctgaagctgctggcagttttgcaggttctttacctgcgttttcaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaaaccagttctctgaagctgctggcagttttgcaggttctttacctgcgttttcaccat 270
Query: 181 ccgcccagctaagcagctctccctccagtccagcctggtgcacaatgggactgggtacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ccgcccagctaagcagctctccctccagtccagcctggtgcacaatgggactgggtacct 210
Query: 241 gggggagga 249
|||||||||
Sbjct: 209 gggggagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
