Query= MSMg01no150_m02.b1 MSMg01no150_m02.b1 CHROMAT_FILE:
MSMg01no150_m02.b1 PHD_FILE: MSMg01no150_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:24 2005
(662 letters)
>mm_chr1_80219295_80220357
Length = 1063
Score = 1154 bits (597), Expect = 0.0
Identities = 639/653 (97%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 3 ggaattcttcaa-attaatttttctctcaaattgccctgttgtcctaaatatcacgtatc 61
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ggaattcttcaacactaatttttctctcaaattgccctgttgtcctaaatatcacgtatc 774
Query: 62 attagcctgtttgagccaggagccagtcatggtcctgcaccaagttattctgtctcaggt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 attagcctgtttgagccaggagccagtcatggtcctgcaccaagttattctgtctcaggt 714
Query: 122 ctcttttcagttttctcccccagcctccacctccttgagttggtaaagtgcttcagcagc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ctcttttcagttttctcccccagcctccacctccttgagttggtaaagtgcttcagcagc 654
Query: 182 ctgacctgtaacacttggccttgctttattacatactctaatatcctgaattcctctaga 241
|||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 653 ctgacctgtaacacttggtctcgctttattacatactctaatatcccgaattcctctaga 594
Query: 242 gcacttggtgttgtagatagggtcattatacacacggagagagcctactatcaaaacttg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gcacttggtgttgtagatagggtcattatacacacggagagagcctactatcaaaacttg 534
Query: 302 aatttgtcatgaactattgagaaaatgccatccactagtcagcaggtactggctaggtgt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aatttgtcatgaactattgagaaaatgccatccactagtcagcaggtactggctaggtgt 474
Query: 362 tatttctatgaaccaggaggtgcgtccacttaactgtatctagttcccattgaccccatg 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tatttctatgaaccaggaggtgcgtccacttaactgtatctagttcccattgaccccata 414
Query: 422 tcacccatctaccttcttagctttgtgtgttctcgactcagagtcagaaaattggttaag 481
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 413 tcacccatctaccttcttagctttgtgtgttcttgactcagagtcagaaaattggttaag 354
Query: 482 gtcccatctagctgatgagctcagtcacatgtcatagtaacagcagtctgtctcttcctc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gtcccatctagctgatgagctcagtcacatgtcatagtaacagcagtctgtctcttcctc 294
Query: 542 cccctatcaccaagctcttccaacaggctcttagcaagctgtgttctgggagtctctgga 601
|||||||||||||||| |||||| ||||||||||||| ||||||||| |||| |||||||
Sbjct: 293 cccctatcaccaagcttttccaaaaggctcttagcaaactgtgttcttggagcctctgga 234
Query: 602 ttggagagagagccatgcgtaaagaggcttctattttttttttatgatttatt 654
||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 233 ttggagatagagccatgcgtaaagaggcttctattctttttttatgatttatt 181
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space: 686556
Effective search space used: 686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_m02.g1 MSMg01no150_m02.g1 CHROMAT_FILE:
MSMg01no150_m02.g1 PHD_FILE: MSMg01no150_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:24 2005
(344 letters)
>mm_chr1_80074967_80075710
Length = 744
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%)
Strand = Plus / Plus
Query: 1 aaccattttcagacagaacacacttgaaaatgaaaagttgaattgcgtaaaggctccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaccattttcagacagaacacacttgaaaatgaaaagttgaattgcgtaaaggctccttt 260
Query: 61 cctgccacttttctctgaacaatatggtgcagctgtttacaaagcatggacaccactgtg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgccactcttctctgaacaatatggtgcagctgtttacaaagcatggacaccactgtg 320
Query: 121 gtttctaaaagtaatgtcgaaataattgaaaggctatagaagcaaggtcataggttatgc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttctaaaagtaatgttgaaataattgaaaggctatagaagcaaggtcataggttatgc 380
Query: 181 gcacatactaggctggttcatgtaaggagaccgagcaggcagtgatcctggaacccatcc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 gcacatactaggctggttcatgtaaggagaccgagcaggcaatgatcctggaacccatcc 440
Query: 241 tccacagatggctgcgcttttatgattccactcgtgcttggggatccctagttttgcctt 300
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 441 tccacagatggctgcgcttttatgattccacttgtgctcggggatccctagttttgcctt 500
Query: 301 cacagagcagttctgcatccaatgaacagctaaagagttgcgag 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacagagcagttctgcatccaatgaacagctaaagagttgcgag 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
