Query= MSMg01no151_i05.b1 MSMg01no151_i05.b1 CHROMAT_FILE:
MSMg01no151_i05.b1 PHD_FILE: MSMg01no151_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:20 2005
(255 letters)
>mm_chr1_129710239_129710893
Length = 655
Score = 485 bits (251), Expect = e-142
Identities = 255/257 (99%), Gaps = 2/257 (0%)
Strand = Plus / Plus
Query: 1 aattcaaggagcaccttagctcctcttaaatgtcctaaggttcctgaactccaaggttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcaaggagcaccttagctcctcttaaatgtcctaaggttcctgaactccaaggttat 260
Query: 61 catgagataacgggaaattccagcttcttgggcttcattgctccaaagcctgatctcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgagataacgggaaattccagcttcttgggcttcattgctccaaagcctgatctcaaa 320
Query: 121 agtgtcatgtgtgtacacacatacacacaca--cacacacacacacacatttctgacagg 178
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 agtgtcatgtgtgtacacacatacacacacatacacacacacacacacatttctgacagg 380
Query: 179 ttggctacaccatcacagtctgcattccctagactcaccctaccttcccaacttcctcca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggctacaccatcacagtctgcattccctagactcaccctaccttcccaacttcctcca 440
Query: 239 gacttcttttgccagag 255
|||||||||||||||||
Sbjct: 441 gacttcttttgccagag 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no151_i05.g1 MSMg01no151_i05.g1 CHROMAT_FILE:
MSMg01no151_i05.g1 PHD_FILE: MSMg01no151_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:20 2005
(336 letters)
>mm_chr1_129842056_129842791
Length = 736
Score = 638 bits (330), Expect = 0.0
Identities = 333/334 (99%)
Strand = Plus / Minus
Query: 1 tgtagaccagggccaggctgacctcaaactgcctgcttctgcctctgggatgcactggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tgtagaccagggccaggctgacctcaaactgcctgcttctgcctctgggatgcactggtc 475
Query: 61 tgcagtagtaagtggccactgcattgagatctggacatcccaacatcctgcctttgtact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgcagtagtaagtggccactgcattgagatctggacatcccaacatcctgcctttgtact 415
Query: 121 gatgctgttggagagacgcagctgtggacagctagcatcccacttttgggtgtcagccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gatgctgttggagagacgcagctgtggacagctagcatcccacttttgggtgtcagccag 355
Query: 181 gttccctgggtagacatctgcctctgagcacaattttgttagccaaatgacaaatgatca 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gttccctgggtagatatctgcctctgagcacaattttgttagccaaatgacaaatgatca 295
Query: 241 tttttcatagatgtcacagtgcctacaagtgactagagctgaccctgctctggatctatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tttttcatagatgtcacagtgcctacaagtgactagagctgaccctgctctggatctatc 235
Query: 301 caggcccttctaggttcaggatttaactgataac 334
||||||||||||||||||||||||||||||||||
Sbjct: 234 caggcccttctaggttcaggatttaactgataac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
