Query= MSMg01no151_m13.b1 MSMg01no151_m13.b1 CHROMAT_FILE:
MSMg01no151_m13.b1 PHD_FILE: MSMg01no151_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:41 2005
(235 letters)
>mm_chr1_180966191_180966825
Length = 635
Score = 433 bits (224), Expect = e-126
Identities = 230/232 (99%)
Strand = Plus / Plus
Query: 1 gctggtctggcttgttggcctttggatctctttcttccctttcaattcttttctacatga 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 gctggtctggcttgttggcctttggatctctttcctccctttcaattcttttctacatga 260
Query: 61 cacttcaccaggttatttctgagtggaagaacattgtaggcaccattcctccagctgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacttcaccaggttatttctgagtggaagaacattgtaggcaccattcctccagctgctg 320
Query: 121 gaatctacttatcctctaagctcctggaagatgggcatcccatactaaacctacagtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatctacttatcctctaagctcctggaagatgggcatcccatactaaacctacagtcct 380
Query: 181 gaggggctgccagtgcttgtctctcttataacaatatatttagagagactca 232
|||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggggctgccagtgcctgtctctcttataacaatatatttagagagactca 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no151_m13.g1 MSMg01no151_m13.g1 CHROMAT_FILE:
MSMg01no151_m13.g1 PHD_FILE: MSMg01no151_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:41 2005
(317 letters)
>mm_chr1_181069383_181070099
Length = 717
Score = 594 bits (307), Expect = e-174
Identities = 313/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 1 ttgttctgaggaattaggcaagaacatgtcttcagtcagcaattgtgaagtgccaactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttgttctgaggaattaggcaagaacatgtcttcagtcagcaattgtgaagtgccaactag 431
Query: 61 gagtcaggagcagtcgcaccttctgcctgtgactttcacacctatcttctgaggtaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 430 gagtcaggagcagtcgcaccttctgcctgtgactttcacacctatcttctgaggtagcag 371
Query: 121 tgttaatcccgtttaagagcagagggatcaggacacaggcctttaggacaacccactggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgttaatcccgtttaagagcagagggatcaggacacaggcctttaggacaacccactggc 311
Query: 181 tcattacctagtgtcttgcagagttaataaatgctctctgaatggagaaataagcaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tcattacctagtgtcttgcagagttaataaatgctctctgaatggagaaataagcaaaat 251
Query: 241 tagtgatcaagtcaggctttaaaatcagatcttatagcctcagacccagctttctttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 250 tagtgatcaagtcaggctttaaaatcagatcttatagcctcagacccagcttt-tttttt 192
Query: 301 ttttttttttttttt 315
|||||||||||||||
Sbjct: 191 ttttttttttttttt 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
