Query= MSMg01no152_b12.b1 MSMg01no152_b12.b1 CHROMAT_FILE:
MSMg01no152_b12.b1 PHD_FILE: MSMg01no152_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:06 2005
(331 letters)
>mm_chr1_34149535_34150265
Length = 731
Score = 563 bits (291), Expect = e-165
Identities = 321/331 (96%)
Strand = Plus / Plus
Query: 1 ttgtccgtgtggcgctttaaccatattatcaccaatatatcaatcatagttgcgtcttgc 60
||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||
Sbjct: 201 ttgtccgtgtggcgctttaaccacataattaccaatatatcaatcatagttgcgtctagc 260
Query: 61 gtgggtcgagaccacacaccaggttagttattcacactttcctgtatttcattctcacag 120
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgggttgagaccacacaccaggtcagttattcacactttcctgtatttcattctcacag 320
Query: 121 tggtcgctgtagacacagcatggttactcttaccactgtgttacagagatcccataattt 180
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cggccgctgtagacacagcatggttactcttaccactgtgttacagagatcccataattt 380
Query: 181 cccaaggtttaacagtagtcatcaatagggcagtgtggaaaaattaggcgaagaggttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaaggtttaacagtagtcatcaatagggcagtgtggaaaaattaggcgaagaggttac 440
Query: 241 acagtgtcctagggctgaagagacgcctaaggaaaaatgtaaaaattttaagctaggtct 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagtgtccaagggctgaagagacgcctaaggaaaaatgtaaaaattttaagctaggtct 500
Query: 301 tttgttctttcttccatgctaaatactttag 331
|||||||||| ||||||||||||||||||||
Sbjct: 501 tttgttcttttttccatgctaaatactttag 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_b12.g1 MSMg01no152_b12.g1 CHROMAT_FILE:
MSMg01no152_b12.g1 PHD_FILE: MSMg01no152_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:06 2005
(393 letters)
>mm_chr1_34298593_34299385
Length = 793
Score = 673 bits (348), Expect = 0.0
Identities = 373/386 (96%), Gaps = 8/386 (2%)
Strand = Plus / Minus
Query: 5 gggggctcgtgaagatcggtgcagtatggagagctggctgctgaagcgtgagactcactt 64
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gggggctcatgaagatcggtgcagtatggagagctggctgctgaagcgtgagactcactt 506
Query: 65 tagaagtgtagactcaatggcaacacaaccaagtaggtcaagaagccaagaacatgtctg 124
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 505 tagaagtgtagactcaatggcaacacaaccaagtaggtcaagaggccaagaacacgtctg 446
Query: 125 cccgaggggccaaaatccaacaggggcaaatggaaaagcagaggcacgtggacacagggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccgaggggccaaaatccaacaggggcaaatggaaaagcagaggcacgtggacacagggc 386
Query: 185 aaatgaggccttccataacaaccacagcagaaggtgtagacctagcggaaggtggaaggt 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatggggccttccataacaaccacagcagaaggtgtagacctagcggaaggtggaaggt 326
Query: 245 gactcagggtaagacccatacgcacctggtggactcagagaggaggtgctagcgctgacc 304
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacacagggtaagacccatacgcacctggtggactcagagaggaggtgctagcgctgacc 266
Query: 305 tggaacagtacctgaccccgagagtaagagtaagtttagagcctttggccatgagtatca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggaacagtacctgaccccgagagtaagagtaagtttagagcctttggccatgagtat-- 208
Query: 365 gttccacagagggaaatcatatttca 390
||||||||||||||||||||
Sbjct: 207 ------cagagggaaatcatatttca 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
