CCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTAAATCCACCCTCCTTTCATTTGCAATCCATGGTCAGTCAG
AGTGTACCTGGATACTTCTACTAATTGATCTTTATAGCTTTTACTACATA
CATAGTATCTTCTTAACTGGTAGGATAGGGTGTTAATATCTTGGAATAGG
GTGTTATATGACTATCAGTAACAGACACTAATCTACCTCTGAGTAAGTCA
GGTAAATGTCTAACAACTTACATTTCTGGGAAAAGTGTGAATAAATCCAA
AACACTTAACATCTATGGAAATCCAGGAAGGACTGCTGTTTTCCCCTCCA
CCAAAGTAAATAAGTTCACGCACTACAGGACTTTTTTGAATATTACAGTG
AACACATGCTTAAATGAGACACTCTTGGCCATTTGTATTGAAGAACCCAC
ACTTAGTTTTGTTTGTTTGGGCCATAAATCTTTATTCTGAATGTAAGAAA
CATAGCAAATGTTGGCATAACCTTTTGGTGCTTTCACTATAATTAACAAT
GGTTTTGAGCCTTGAGTCTACAGAGCTGATGTAGATGCTATGATGCTGCT
ACCTGACTTGTTGCATACACCACCCTTGTTGCTACACTAACATCACCGGG
AACTCGTATTCTAGATTATGATTTTCCCTGCCCTCTTCTGAAACCCGATT
ACTGATTATGACCCGCCTTTTATCTTGCCTTTTN

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATGGC
TGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAG
ACCAAAAATTCAGGTGACAGCAAATGCTGGCGAGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGA
AATCAGTCTGGTGGTTCCTCAGAAAATTAGACATAGTACTACGGGAGGAT
CCCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACTAGTAA
GAAAGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGAATAGAGAAA
ATGTGGTACATTTACACAATGGAATAGTACTCAGCTATTAAAATGAATGA
AATTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGA
GTGATGTAACCCAATCACAAAAGAACTCACACAGTATGTACTCACTGATA
AGTGGATATTAGCCCAGAAACTTAGAATACCCTCTAAGATACAATTTGCT
AAACACATGAACCTCAAGAAGAACGAAGACCAAC

Query= MSMg01no152_b19.b1 MSMg01no152_b19.b1 CHROMAT_FILE:
MSMg01no152_b19.b1 PHD_FILE: MSMg01no152_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:07 2005
         (502 letters)



>mm_chr1_110265568_110266469
          Length = 902

 Score =  932 bits (482), Expect = 0.0
 Identities = 494/498 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctaaatccaccctcctttcatttgcaatccatggtcagtcagagtgtacctgg 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gaattctctaaatccatcctcctttcatttgcaatccatggtcagtcagagtgtacctgg 643

                                                                       
Query: 65  atacttctactaattgatctttatagcttttactacatacatagtatcttcttaactggt 124
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atacttctactaattgatcttcatagcttttactacatacatagtatcttcttaactggt 583

                                                                       
Query: 125 aggatagggtgttaatatcttggaatagggtgttatatgactatcagtaacagacactaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aggatagggtgttaatatcttggaatagggtgttatatgactatcagtaacagacactaa 523

                                                                       
Query: 185 tctacctctgagtaagtcaggtaaatgtctaacaacttacatttctgggaaaagtgtgaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tctacctctgagtaagtcaggtaaatgtctaacaacttacatttctgggaaaagtgtgaa 463

                                                                       
Query: 245 taaatccaaaacacttaacatctatggaaatccaggaaggactgctgttttcccctccac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 taaatccaaaacacttaacatctatggaaatccaggaaggactgctgttttcccctccac 403

                                                                       
Query: 305 caaagtaaataagttcacgcactacaggacttttttgaatattacagtgaacacatgctt 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 402 caaagtaaataagttcacgcactacaggacttttttgaatattacagcgaacacatgctt 343

                                                                       
Query: 365 aaatgagacactcttggccatttgtattgaagaacccacacttagttttgtttgtttggg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aaatgagacactcttggccatttgtattgaagaacccacacttagttttgtttgtttggg 283

                                                                       
Query: 425 ccataaatctttattctgaatgtaagaaacatagcaaatgttggcataaccttttggtgc 484
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ccataaatatttattctgaatgtaagaaacatagcaaatgttggcataaccttttggtgc 223

                             
Query: 485 tttcactataattaacaa 502
           ||||||||||||||||||
Sbjct: 222 tttcactataattaacaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)