Query= MSMg01no152_c08.b1 MSMg01no152_c08.b1 CHROMAT_FILE:
MSMg01no152_c08.b1 PHD_FILE: MSMg01no152_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:10 2005
(317 letters)
>mm_chr1_57769771_57770487
Length = 717
Score = 578 bits (299), Expect = e-169
Identities = 310/314 (98%)
Strand = Plus / Minus
Query: 4 gaattcttcctgagacttaaggccgacaacaaagcaatgaagagtttggaaggtagctga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 517 gaattcttcctgagacttaaggccgacaacaaagcaatgaagagtttggaaggcagctga 458
Query: 64 gtcttaattgtgtaaacattgcttttcctcccccagggccactgcactcagcaatgcgta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gtcttaattgtgtaaacattgcttttcctcccccagggccactgcactcagcaatgcgta 398
Query: 124 gtttcccatgtaactcaaacgggtctgtggaaagctgaccctgtaggaatgtccctgggn 183
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 397 gtttcccatgtaactcaaacgggtccgtggaaagctgaccctgtaggaatgtccctgggc 338
Query: 184 ccactctgcctcacttcttcatagtcttgcccagggattggctgcagtcctaggcaggag 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 337 ccactctgcctcacttcttcatagtcttgcccagggattggctgcagtcctaggtaggag 278
Query: 244 agattcctttccctgtcttcttccttttatccagctctgtcctgaaattccaagtaacca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 agattcctttccctgtcttcttccttttatccagctctgtcctgaaattccaagtaacca 218
Query: 304 tggtatacgtaagt 317
||||||||||||||
Sbjct: 217 tggtatacgtaagt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_c08.g1 MSMg01no152_c08.g1 CHROMAT_FILE:
MSMg01no152_c08.g1 PHD_FILE: MSMg01no152_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:10 2005
(301 letters)
>mm_chr1_57664721_57665422
Length = 702
Score = 487 bits (252), Expect = e-142
Identities = 295/322 (91%), Gaps = 21/322 (6%)
Strand = Plus / Plus
Query: 1 tgacttaatgagatccatcaatacggcacagcgctttacttatcttattaattggtgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacttaatgagatccatcaatacggcacagcgctttacttatcttattaattggtgtag 260
Query: 61 ctcaggggctgggatagtctcattagggaactcttcggcctcctacagaagcacggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaggggctgggatagtctcattagggaactcttcggcctcctacagaagcacggagag 320
Query: 121 gtctgggtctcagcattcccaccggtgggg------------gggggggggtcctatgct 168
||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 gtctgggcctcagcattcccaccggtggggcggggggggggggggggggggtcctatgct 380
Query: 169 ccaaagagcaggagttctgaaagtcagcttgcatcaaagctgcaagaaggcccggccatt 228
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagagagcaggagttctgaaagtcagcttgcatcaaagctgcaagaaggcccggccatt 440
Query: 229 cagatta---------ctcctgggctctggattttgaaggcgtggctcaggagcaacaga 279
||||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 441 cagattattcagattactcctgggctccggattcggaaggcgtggctcaggagcaacaga 500
Query: 280 tcttcactttgatgtttttgac 301
||||||||||||||||| ||||
Sbjct: 501 tcttcactttgatgtttctgac 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 702
Length adjustment: 9
Effective length of query: 292
Effective length of database: 693
Effective search space: 202356
Effective search space used: 202356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
