CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCAACTGAATACACAGAATGGCTGAGAAACACCTGAAAAAATGTTCAAC
ATCCTTAATCATCAGGGAAATGCAAATCAAAACAACTCTGAGATATCAAC
TCACACCAGTCAGAAAGGCTAAGATCAAAAATTCAGGTGAGAGCAGATGC
TAGAGAGGATGTGGAGAAAGAGGAACACGCCTCCATTTTTGGTGGGATTG
CAAGCTGGTACAAACACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAAT
TGGACATAGTACTACCAGAAGATCCAGCAATACCTCTCCTGGGCATATAT
CCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCCACTATGTTCAT
GGCAGCCTTATTTATAATAACCAAAAGCTAGAAAGAACCCAGATGTTGCT
CAACAGAGGAATGGATAAAAAAATTGTGGAACATTTACACAATGGAGTAC
TACATAGCAATTAAAAACAATGAATTTATGAAATTCTTAAGCAAATGGAT
GGATCTGGAGAATATCATCTTGAGTGAGGTAACCTAATCACAAAAGAACA
CACATGATACACACTCCCTAGTAAGTGGATATTAACCCAGAAACTTAGAA
TACCCAAGATACAATTTGCAAAACACTAGAAACTTCAGAAGAAAGAAGAC
CAAAGTN

AATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGGGCAGACTCAGAAAGATAAAGCCCTCA
AACAATGCTGCCAACAAACCCTCCACAGATAAACTGCAGCTTCTATTTAA
CCTGCTATTTTATTAACCATAATGAAAAATAACCATTTTATTAACTATCT
TAAACGTCAAGGCTTAAGGCAGATGAATGCTTTTATCTACAGGAAATGCG
GTCTGAGATACAAAGCGACTCAGGCTAGTCTCAATACCAAGAGGTATTCA
CTTTATCCTGACAACTGGGAAGAGAAAATTTGCTGAAAATCATACTTCTG
ATAATTCAAGACACCCTCACCCTAACCTCCCGGGAGGTGGGCAGGGGCGG
AACAGCCCTAGGGATTTTGTGTTATTGAGCCAATCTCATGTAGTCCAGGC
TGAACTCAAACTTGCCACGCAGTCCAGGATGACCTTGGATTTCAGATCTT
CCTAGCCCCACGTCCCAAGTACAGGCTTACAGCCTGTTGGATTGCTCGTG
GGATCACACTATTATGCCTGGTTTTATGTAATGGAGATGGTGCGCGGGAC
TTCCTGAAGGTTGGGTAAGCACTTCACAGACTGAGCTATATTCCCAGTCG
AACTTCTGGACGTCCAAATGTGGGAAGATTTTACTAAAAATTGCAGATTA
TATTC

Query= MSMg01no153_o23.g1 MSMg01no153_o23.g1 CHROMAT_FILE:
MSMg01no153_o23.g1 PHD_FILE: MSMg01no153_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:26 2005
         (596 letters)



>mm_chr1_14909433_14910430
          Length = 998

 Score =  969 bits (501), Expect = 0.0
 Identities = 534/545 (97%), Gaps = 2/545 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggcagactcagaaagataaagccctcaaacaatgctgccaacaaaccctccacagata 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 545 agggcagactcagaaagataaagccctcaaacaatgctaccaacaaaccctccgcagata 486

                                                                       
Query: 61  aactgcagcttctatttaacctgctattttattaaccataatg-aaaaataaccatttta 119
           ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 485 aactgcagcttctatttaacctgctattttattaaccataatgaaaaaacaaccatttta 426

                                                                       
Query: 120 ttaactatcttaaacgtcaaggcttaaggcagatgaatgcttttatctacaggaaatgcg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttaactatcttaaacgtcaaggcttaaggcagatgaatgcttttatctacaggaaatgcg 366

                                                                       
Query: 180 gtctgagatacaaagcgactcaggctagtctcaataccaagaggtattcactttatcctg 239
           ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||
Sbjct: 365 gtctgagatacaaagcgactcaggctagtctcaattctaagaggtattcacttcatcctg 306

                                                                       
Query: 240 acaactgggaagagaaaatttgctgaaaatcatacttctgataattcaaga-caccctca 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 305 acaactgggaagagaaaatttgctgaaaatcatacttctgataattcaagagcaccctca 246

                                                                       
Query: 299 ccctaacctcccgggaggtgggcaggggcggaacagccctagggattttgtgttattgag 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 245 ccctaacctcccgggaggtgggcaggggcggaacagccctagggattttgtcttattgag 186

                                                                       
Query: 359 ccaatctcatgtagtccaggctgaactcaaacttgccacgcagtccaggatgaccttgga 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ccaatctcatgtagtccaggctgaactcaaacttgccacgcagtccaggatgaccttgga 126

                                                                       
Query: 419 tttcagatcttcctagccccacgtcccaagtacaggcttacagcctgttggattgctcgt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 125 tttcagatcttcctagccccacgtcccaagtacaggcttacagcctgttggattgctcgc 66

                                                                       
Query: 479 gggatcacactattatgcctggttttatgtaatggagatggtgcgcgggacttcctgaag 538
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 65  gggatcacactattatgcctggttttatgtaatggagatggtgcgcaggacttcctgaag 6

                
Query: 539 gttgg 543
           |||||
Sbjct: 5   gttgg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 998
Length adjustment: 10
Effective length of query: 586
Effective length of database: 988
Effective search space:   578968
Effective search space used:   578968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)