NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCCCCCCCCCCCCCCTC
ATTCCCTCTCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCCGCGGAATTCACCTACTGTCCGGTGTCTAGCCTACACAGGACCAAGG
GACTCTCCTCCCATTGATGCCTGAGAAGACCATCCCCTTACATATGCAGC
TGGAACCAACACTCCTTGTTTGGTGGCTTAGTGGATGGGAACTCTGGAGG
ATCTAGCTGGTTTATATTTGTGTTCTTCCCATGGGGTTGCAAACCCCTTC
AGCTCTTTCAGTCCTGTCTCTAACTCCTCCACTGGAGACCCCATGCTAAG
TCCAATGGTTGGCTCTGAGCATCCACATCTGTATTTGTCAGGCTCTGGCA
GAGCTTCCCAGGAAAGAGCTATATCAGGCTCCGTTCAGCAAGTACTTCAT
GGCATCCACAATAGTGTCTGGGTTTGGTGACTGTATATGGGGTGGATCCC
CAGGTGGGGCAGTCTCTGGGTGGCCTTTCCTTCAGTGTCTGCTCTACACA
TTGTCTTCAGTATTTTCTTCCCCCTTTCCTAAGGAGTACCGAAGCAACCC
ACACTTTGGCCTTCCTTCTTCTTGAACTTCCCGTGGCCCGGGAATTGTAT
TCTTGGGTATTGGGAGCTTTTGAGCTTATATCCCTTTATCAGTGAGTGGA
AACTGGGGGGCTCTTTTGGGAATGGCTTACCTCATTCCGAATGATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXAAAGTCTAAAGGCATCTACAATTTTCTCCTTAAATGAACATGAGT
CCCAAGTTCTCCCTTACCAAGGGGTGTCACTTACCTTATTTTCATTAATT
GGAAAGGGGAAAAAACCCTGGCAAATAACATCTAGAGTCAAGATTTACAA
CATTATTTTATAAGTTATAAGAATAAGCTAGTTGTATATTTAAAATCAGG
CACTGTCCATGACTTGTATTCCATTTAAACAACTGTAAAACATTAATGTT
ATTGCTTTCAAAACTGACCATATCATGTCTAGTTTTATAATAGTGTAATC
AGAAGGAAAAGAATACAAAAGTTTTAATTATTTGCTACCATTAAATTGAG
AAATAAAATTTGAAGATCATAATTTAATCCTGAATATCTGGTGCTAGAAG
ATTTTCGCTATTTTATAGTTTCACTACATACATGAAGCTTAAAGTTATGG
CACTTGTTTCAAATTTTTCTTTCAGTGAGACAATGTTATGTTTTGACTAA
TCTCTTGTTATAACTTTACGAAACCTAGAAAAATATATAAAATTCCATGC
ACAAAACTTTGGCCTATAGGAAGAGAAGTGGCTTTTCTAAGCCTCAGATG
ACCTGTCTTGAAATTAACN

Query= MSMg01no154_i01.g1 MSMg01no154_i01.g1 CHROMAT_FILE:
MSMg01no154_i01.g1 PHD_FILE: MSMg01no154_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:09 2005
         (461 letters)



>mm_chr1_112012712_112013572
          Length = 861

 Score =  884 bits (457), Expect = 0.0
 Identities = 460/461 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaagtctaaaggcatctacaattttctccttaaatgaacatgagtcccaagttctccctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaagtctaaaggcatctacaattttctccttaaatgaacatgagtcccaagttctccctt 602

                                                                       
Query: 61  accaaggggtgtcacttaccttattttcattaattggaaaggggaaaaaaccctggcaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 accaaggggtgtcacttaccttattttcattaattggaaaggggaaaaaaccctggcaaa 542

                                                                       
Query: 121 taacatctagagtcaagatttacaacattattttataagttataagaataagctagttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taacatctagagtcaagatttacaacattattttataagttataagaataagctagttgt 482

                                                                       
Query: 181 atatttaaaatcaggcactgtccatgacttgtattccatttaaacaactgtaaaacatta 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 481 atatttaaaatcaggcactgtccaggacttgtattccatttaaacaactgtaaaacatta 422

                                                                       
Query: 241 atgttattgctttcaaaactgaccatatcatgtctagttttataatagtgtaatcagaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgttattgctttcaaaactgaccatatcatgtctagttttataatagtgtaatcagaag 362

                                                                       
Query: 301 gaaaagaatacaaaagttttaattatttgctaccattaaattgagaaataaaatttgaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaaagaatacaaaagttttaattatttgctaccattaaattgagaaataaaatttgaag 302

                                                                       
Query: 361 atcataatttaatcctgaatatctggtgctagaagattttcgctattttatagtttcact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcataatttaatcctgaatatctggtgctagaagattttcgctattttatagtttcact 242

                                                    
Query: 421 acatacatgaagcttaaagttatggcacttgtttcaaattt 461
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acatacatgaagcttaaagttatggcacttgtttcaaattt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space:   383801
Effective search space used:   383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)