Query= MSMg01no154_m09.b1 MSMg01no154_m09.b1 CHROMAT_FILE:
MSMg01no154_m09.b1 PHD_FILE: MSMg01no154_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:30 2005
(559 letters)
>mm_chr1_169665414_169666369
Length = 956
Score = 1017 bits (526), Expect = 0.0
Identities = 548/556 (98%), Gaps = 3/556 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatgcagagccctgctgaattcagaatgattttgttcatagtaaccctgactgc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatgcagagctctgctgaattcagaatgattttgttcatagtaaccctgactgc 263
Query: 64 ttccacttgtggctgataagcctgatgcaagaggcacacttggctacatggcttgtctgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttccacttgtggctgataagcctgatgcaagaggcacacttggctacatggcttgtctgc 323
Query: 124 tgggggttcagctcccaccagggcatcttgctttccttccagcatctggctttccaagga 183
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgggggttcagctcccaccagggtatcttgctttccttccagcatctggctttccaagga 383
Query: 184 ttgactcaagattctttggagcccagtagcgtttatatgtgagccaaagaccaacttccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgactcaagattctttggagcccagtagcgtttatatgtgagccaaagaccaacttccc 443
Query: 244 ttactgtaagtactgtgaatatgacaatatctatttatcagtatcagactcggactaata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttactgtaagtactgtgaatatgacaatatctatttatcagtatcagactcggactaata 503
Query: 304 gtttcttacagaaactgtcttctccatttatttttcctttcttctattttttttataccc 363
||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||
Sbjct: 504 gtttcttacagaaactgtcttctccgtgtatttttcctttcttctattttttt-ataccc 562
Query: 364 tacctcgatgagcaaaccctgtaatctcttctctggatgtttgacctgcgcaagtgcctc 423
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 taccttgatgagcaaaccctgtaatctcttctctggatgtttgacctgcgcaagtgcctc 622
Query: 424 tgccagccagcctttgtggaaccacggagagaggagaaggtatatttgtaagcagggtca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgccagccagcctttgtggaaccacggagagaggagaaggtatatttgtaagcagggtca 682
Query: 484 gtggtcttcacacacacgttgctcttcagagactgtcttcattgacacccaaactctaag 543
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtggtcttcacacac--gttgctcttcagagactgtcttcattgacacccaaactctaag 740
Query: 544 agccagttcaaacaca 559
||||||||||||||||
Sbjct: 741 agccagttcaaacaca 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 956
Length adjustment: 10
Effective length of query: 549
Effective length of database: 946
Effective search space: 519354
Effective search space used: 519354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_m09.g1 MSMg01no154_m09.g1 CHROMAT_FILE:
MSMg01no154_m09.g1 PHD_FILE: MSMg01no154_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:30 2005
(469 letters)
>mm_chr1_169772839_169773707
Length = 869
Score = 710 bits (367), Expect = 0.0
Identities = 373/375 (99%)
Strand = Plus / Minus
Query: 1 tggggtggagaggtttaagcaggaatggcagtcagggatggggccaatgagggcacacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tggggtggagaggtttaagcaggaatggcagtcagggatggggccaatgagggcacacaa 316
Query: 61 agagttaatcaaaatttaatatttttgagaaaaccaggtagaaacctgagatagcctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agagttaatcaaaatttaatatttttgagaaaaccaggtagaaacctgagatagcctgca 256
Query: 121 ttgctaggtgctactgctcctcaaactcatcatttgtctaataaacaagaatccaagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttgctaggtgctactgctcctcaaactcatcatttgtctaataaacaagaatccaagcag 196
Query: 181 gaagacaggacatcaagtgagggatggggttgccatctcacagccacatctctgactcat 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 195 gaagacaggacatcaagtgagggatggggttgccatctcacagtcacatctctgactcat 136
Query: 241 aattgttcctgtctgaaagaatttcagggatggaaatggagaggggcttgaggaaaagat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 aattgttcctgtctgaaagaatttcagggatggaaatggagaggggcttgaggaaaagac 76
Query: 301 ggtccagcgacaggcccaaagtgggatctagctcaacgggaggtcccaaggcctgacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ggtccagcgacaggcccaaagtgggatctagctcaacgggaggtcccaaggcctgacact 16
Query: 361 aggctatgaagtgct 375
|||||||||||||||
Sbjct: 15 aggctatgaagtgct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
