Query= MSMg01no155_b22.b1 MSMg01no155_b22.b1 CHROMAT_FILE:
MSMg01no155_b22.b1 PHD_FILE: MSMg01no155_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:57 2005
(451 letters)
>mm_chr1_134756334_134757184
Length = 851
Score = 810 bits (419), Expect = 0.0
Identities = 443/451 (98%)
Strand = Plus / Plus
Query: 1 aatgaagccactcaacggcgcagagctgctcccagtggcctggaagcatcttttctcaag 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgaagccactcaacggtgcagagctgctcccagtggcctggaagcatcttttctcaag 260
Query: 61 tgatggggccttgtgtccaagctacagaaccctggaggctgggcaaagatgtcctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgatggggccttgtgtccaagctacagaaccctggaggctgggcaaagatgtcctgagat 320
Query: 121 gtcaccctagtatcccttggagtacctgtgtttgtatagtaagataagtgagtcagactg 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gtcaccctagtatcccttggagtacctgtgtttgtgtagtaagataagtgagtcagactg 380
Query: 181 ggagaggcagcagcccagcaggaacaatgtgactctgaggagcatgcctgggatttgacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagaggcagcagcccagcaggaacaatgtgactctgaggagcatgcctgggatttgacc 440
Query: 241 tctgttctgccttctccgcactctatccctgttcaccccacggctgcctgtggtcatcat 300
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 441 tctgtcctgccttctccgcactctaaccctgttcaccccacggctgcctgtggtcgtcat 500
Query: 301 acagagcccatcctcatctctgacctcattggatcctcactatcagtttttagccacctc 360
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 501 acagagcccatcctcatctctgacctcattggattctcactatcagttcttagccacctc 560
Query: 361 gctcacttcctgaacccagagatgctgtgcggcctgtctataaaaatcatactgctcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctcacttcctgaacccagagatgctgtgcggcctgtctataaaaatcatactgctcatt 620
Query: 421 agacttaacaaaatgcttgattacaggacga 451
||||||||||||||||||||||||| |||||
Sbjct: 621 agacttaacaaaatgcttgattacaagacga 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_b22.g1 MSMg01no155_b22.g1 CHROMAT_FILE:
MSMg01no155_b22.g1 PHD_FILE: MSMg01no155_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:57 2005
(169 letters)
>mm_chr1_134848810_134849378
Length = 569
Score = 253 bits (131), Expect = 3e-72
Identities = 156/169 (92%), Gaps = 9/169 (5%)
Strand = Plus / Minus
Query: 1 ccaggccaggtgggcagagctgtgtgtgacagtgtgggatggaccctgtgacctcgtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccaggccaggtgggcagagctgtgtgtgacagtgtgggatggaccctgtgacctcgtcta 254
Query: 61 cacagctgctccaaggcttgcaacatctcactcccagcacagcgatgcctgcttttttcc 120
|||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 253 cacagctgctccaaggcttgcaacatctcactcccagcacagtgatgcctgct------- 201
Query: 121 gctgagcctggacctagggccctgcagccagcagtagagaagacttgga 169
| | | |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 200 g--gggtctggacctagggccctgcagccagtagtagagaagacttgga 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
