Query= MSMg01no155_c17.b1 MSMg01no155_c17.b1 CHROMAT_FILE:
MSMg01no155_c17.b1 PHD_FILE: MSMg01no155_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:01 2005
(632 letters)
>mm_chr1_71818966_71819997
Length = 1032
Score = 708 bits (366), Expect = 0.0
Identities = 369/370 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcctctggtccacagccaaaaactcttaagagcctttcactggccctgccatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ggaattctcctctggtccacagccaaaaactcttaagagcctttcactggccctgccatc 311
Query: 64 ttaagagctggaatttgtaggggcagagacctcctgacccctcaactccccaggtctgtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttaagagctggaatttgtaggggcagagacctcctgacccctcaactccccaggtctgtt 251
Query: 124 tggtcaccaggtggctggattgtatccctggttttgcttatgtcatttgtcttagttagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tggtcaccaggtggctggattgtatccctggttttgcttatgtcatttgtcttagttagg 191
Query: 184 gttttactgctgtgaacagacaccatgaccaatgcaagtcttatagaagacagtatttca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gttttactgctgtgaacagacaccatgaccaatgcaagtcttatagaagacagtatttca 131
Query: 244 ctggggctggcttacaggttcagaggttcagtctagtatcatcaaggcagcatccagaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ctggggctggcttacaggttcagaggttcagtctagtatcatcaaggcagcatccagaca 71
Query: 304 ggcgtggtgcaggagaagctgagagttttatatctccatctggaggctgctagcagttga 363
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 70 ggcgtggtgcaggagaagctgagatttttatatctccatctggaggctgctagcagttga 11
Query: 364 ctgactttca 373
||||||||||
Sbjct: 10 ctgactttca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_c17.g1 MSMg01no155_c17.g1 CHROMAT_FILE:
MSMg01no155_c17.g1 PHD_FILE: MSMg01no155_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:01 2005
(452 letters)
>mm_chr1_71658551_71659405
Length = 855
Score = 837 bits (433), Expect = 0.0
Identities = 449/455 (98%), Gaps = 3/455 (0%)
Strand = Plus / Plus
Query: 1 acttgggagtcacgtatcttttgtgcactgattagagaatgtctgacaccttggtgcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgggagtcacgtatcttttgtgcactgattagagaatgtctgacaccttggtgcttc 260
Query: 61 acagaccgtgccttcgactacgatttgtagcgatcaaaggtctgccactccggcagaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaccgtgccttcgactacgatttgtagcgatcaaaggtctgccactccggcagaatc 320
Query: 121 attacatctttcacagtttacagagccgcctactgaacttggagagcgtg--tctcggtc 178
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 attacatctttcacagtttacagagccgcctactgaacttggagagcgtgtctctcggtc 380
Query: 179 acagttctcctttctcttaggtggtcctccagg-aaactcaggatccatgcctcgtgctc 237
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 381 acagttctcctttctcttaggtggtcctccaggaaaactcaggatccatgccttgtgctc 440
Query: 238 cagatctacggatctgcgtatctacgggacaagctatgtttgagggcttacttgttagga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagatctacggatctgcgtatctacgggacaagctatgtttgagggcttacttgttagga 500
Query: 298 ccacggcattgtctgaaggtgaaatggatagctctgcaacgtcctcttcattcttcacgg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccacggcattgtctgaaggtgaaatggatagctctgcaacgtcctcttcattcttcacgg 560
Query: 358 gtgagtagcgcaccaagaggttggtcagctcgatggacggaggcgggtcccaagtgaccc 417
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 gtgagtagcgcaccaagaggttggtcagctcgatggacggaggcggggcccaagtgaccc 620
Query: 418 gcatcgcgtctggaccgatattggtgaatcgcaga 452
|||||| ||||||||||||||||||||||||||||
Sbjct: 621 gcatcgtgtctggaccgatattggtgaatcgcaga 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 855
Length adjustment: 10
Effective length of query: 442
Effective length of database: 845
Effective search space: 373490
Effective search space used: 373490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
