Query= MSMg01no155_c18.b1 MSMg01no155_c18.b1 CHROMAT_FILE:
MSMg01no155_c18.b1 PHD_FILE: MSMg01no155_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:01 2005
(292 letters)
>mm_chr1_71818969_71819660
Length = 692
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Minus
Query: 1 aaaaactcttaagagcctttcactggccctgccatcttaagagctggaatttctaggggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 343 aaaaactcttaagagcctttcactggccctgccatcttaagagctggaatttgtaggggc 284
Query: 61 agagacctcctgacccctcaactccccaggtctgtttggtcaccaggtggctggattgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agagacctcctgacccctcaactccccaggtctgtttggtcaccaggtggctggattgta 224
Query: 121 tccctggttttgcttatgtcatttgtcttagttagggttttactgctgtgaacagacacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tccctggttttgcttatgtcatttgtcttagttagggttttactgctgtgaacagacacc 164
Query: 181 atgaccaatgcaagtcttatagaagacagtatttcactggggctggcttacaggttcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atgaccaatgcaagtcttatagaagacagtatttcactggggctggcttacaggttcaga 104
Query: 241 ggttcagtctagtatcatcaaggcagcatccagacaggcgtggtgcagga 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ggttcagtctagtatcatcaaggcagcatccagacaggcgtggtgcagga 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no155_c18.g1 MSMg01no155_c18.g1 CHROMAT_FILE:
MSMg01no155_c18.g1 PHD_FILE: MSMg01no155_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:01 2005
(511 letters)
>mm_chr1_71658551_71659464
Length = 914
Score = 959 bits (496), Expect = 0.0
Identities = 509/514 (99%), Gaps = 3/514 (0%)
Strand = Plus / Plus
Query: 1 acttgggagtcacgtatcttttgtgcactgattagagaatgtctgacaccttggtgcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgggagtcacgtatcttttgtgcactgattagagaatgtctgacaccttggtgcttc 260
Query: 61 acagaccgtgccttcgactacgatttgtagcgatcaaaggtctgccactccggcagaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaccgtgccttcgactacgatttgtagcgatcaaaggtctgccactccggcagaatc 320
Query: 121 attacatctttcacagtttacagagccgcctactgaacttggagagcgtg--tctcggtc 178
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 attacatctttcacagtttacagagccgcctactgaacttggagagcgtgtctctcggtc 380
Query: 179 acagttctcctttctcttaggtggtcctccagg-aaactcaggatccatgcctcgtgctc 237
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 381 acagttctcctttctcttaggtggtcctccaggaaaactcaggatccatgccttgtgctc 440
Query: 238 cagatctacggatctgcgtatctacgggacaagctatgtttgagggcttacttgttagga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagatctacggatctgcgtatctacgggacaagctatgtttgagggcttacttgttagga 500
Query: 298 ccacggcattgtctgaaggtgaaatggatagctctgcaacgtcctcctcattcttcacgg 357
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 ccacggcattgtctgaaggtgaaatggatagctctgcaacgtcctcttcattcttcacgg 560
Query: 358 gtgagtagcgcaccaagaggttggtcagctcgatggacggaggcggggcccaagtgaccc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgagtagcgcaccaagaggttggtcagctcgatggacggaggcggggcccaagtgaccc 620
Query: 418 gcatcgtgtctggaccgatattggtgaatcgcagatccgtgggaggagggacagctgata 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcatcgtgtctggaccgatattggtgaatcgcagatccgtgggaggagggacagctgata 680
Query: 478 tcaaataaggaggattgagttaatgcgattttaa 511
||||||||||||||||||||||||||||||||||
Sbjct: 681 tcaaataaggaggattgagttaatgcgattttaa 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 914
Length adjustment: 10
Effective length of query: 501
Effective length of database: 904
Effective search space: 452904
Effective search space used: 452904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
