Query= MSMg01no155_o04.b1 MSMg01no155_o04.b1 CHROMAT_FILE:
MSMg01no155_o04.b1 PHD_FILE: MSMg01no155_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:53 2005
(406 letters)
>mm_chr1_131610071_131610876
Length = 806
Score = 741 bits (383), Expect = 0.0
Identities = 398/403 (98%)
Strand = Plus / Minus
Query: 1 aagagaggacattaccagagtgtagtactaaagatccttgggaataaactaaggcagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aagagaggacattaccagagtgtagtactaaagatccttgggaataaactaaggcagctg 544
Query: 61 acagatacatctatataacaagtgtcagtatatactgacatgcgtacatgaaaaagtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 acagatacatctatataacaagtgtcagtatatactgacatgcgtacatgaaaaagtttt 484
Query: 121 aaaccagcaagatagtaccataaggattattaattccttgaactggtgggagtgtgtgta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 483 aaaccagcaagatagtaccataaggattattaattccttgaactggtgggagtgtgtgca 424
Query: 181 ccagaggaggatttgagagggaatagttttaaacatacctaaatattttaagcatccaca 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 423 ccagaggaggatttgagagggaatagttttaaacatacataaatattttaagcatccaca 364
Query: 241 gcatatttagacttttatagtatatattgaagctgtaaaagagtagatgcagcatattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 363 gcatatttagacttttatagtatatattgaagctgtaaaagagtagatgcaacatattct 304
Query: 301 ctctcgatgcaattcgtgtggcaggaagaaatgaaaatgaaagccagagcagagaactgc 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctctcgatgcaattcgtgtgggaggaagaaatgaaaatgaaagccagagcagagaactgc 244
Query: 361 tcttaaaacagatttccctcacatgtgctcactgttgactgag 403
||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 243 tcttaaaacagatttccctcagatgtgctcactgttgactgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_o04.g1 MSMg01no155_o04.g1 CHROMAT_FILE:
MSMg01no155_o04.g1 PHD_FILE: MSMg01no155_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:53 2005
(193 letters)
>mm_chr1_131442782_131443375
Length = 594
Score = 360 bits (186), Expect = e-104
Identities = 192/194 (98%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 1 cttacatgtaaggaacttccttaaatttaaaaagcacattaagaaaagtagaaacatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttacatgtaaggaacttccttaaatttaaaaagcacattaagaaaagtagaaacatgct 260
Query: 61 tgccacagacacactgattcgtta-tggccttcacagtccgcatcgaatcatccaataaa 119
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccacagacacactgattcgttaatggccttcacagtccgcatcgaatcatccaataaa 320
Query: 120 aaatcccatagatgtgtggtgtaattattttatagcttttcctatttttaaaaggaaaga 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatcccatagatgtggggtgtaattattttatagcttttcctatttttaaaaggaaaga 380
Query: 180 gctggcttattgac 193
||||||||||||||
Sbjct: 381 gctggcttattgac 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 594
Length adjustment: 8
Effective length of query: 185
Effective length of database: 586
Effective search space: 108410
Effective search space used: 108410
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
