Query= MSMg01no156_d07.b1 MSMg01no156_d07.b1 CHROMAT_FILE:
MSMg01no156_d07.b1 PHD_FILE: MSMg01no156_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:16 2005
(321 letters)
>mm_chr1_138568129_138568849
Length = 721
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%)
Strand = Plus / Minus
Query: 4 ggaattccagggaacgccaatccatggggcacaaccaggggaagaagcggaggggtgatt 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggaattacagggaacgccaatccatggggcacaaccaggggaagaagcggaggggtgatt 462
Query: 64 gctttgtccagaatgaacgctctagctcaaggttgccgggagcggagaggcattcaacaa 123
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 461 gctttgtccagaatgaatgctctagctcaaggttgctgggagcggagaggcattcaacaa 402
Query: 124 agccaattgcatgccaggcgcaaccttggggcctgaaaccggaataaaaagaccatccac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agccaattgcatgccaggcgcaaccttggggcctgaaaccggaataaaaagaccatccac 342
Query: 184 ggagagttcacgttgtcatgggggaaagaactagtcagtaagtcccacagactgagcgct 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 341 ggagagttcacgttgtcatgggggaaagaactagtcaataagtcccacagactgagcgct 282
Query: 244 ggaaaacacccatgggagaaggagagacgctgaatacccaggggtatcttaccccacacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggaaaacacccatgggagaaggagagacgctgaatacccaggggtatcttaccccacacc 222
Query: 304 agctcttaggagtcaggc 321
||||||||||||||||||
Sbjct: 221 agctcttaggagtcaggc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_d07.g1 MSMg01no156_d07.g1 CHROMAT_FILE:
MSMg01no156_d07.g1 PHD_FILE: MSMg01no156_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:16 2005
(345 letters)
>mm_chr1_138422005_138422748
Length = 744
Score = 592 bits (306), Expect = e-173
Identities = 334/344 (97%), Gaps = 3/344 (0%)
Strand = Plus / Plus
Query: 1 cacttatatggtttgaagaaccctcgagctggcttatggaacttttatctcttctggatt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 cacttatatggtttgaagaaccctcgagctggcttatgaaacttttatctcttctggatt 260
Query: 61 ctagaccagagctccctgtctggccttgcagggacctaagaattgtgtgtttcctggtga 120
||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||
Sbjct: 261 ctagaccagagctccctgtctggtctcgcaggggcctaagaattgtgt--ttcctggtga 318
Query: 121 ttgcgtgtttactgaaatattttaacatttctctaggtcactaagcagatgaaagccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttgcgtgtttactgaaatattttaacatttctctaggtcactaagcagatgaaagccagt 378
Query: 181 actgtggagtgggtcgggtctctggaaaatgccgtcgctgaatggaggacggtaggagga 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 379 actgtggagtgggtcgggtctctggaaaatgctgtcgctgaatggaggacggtaggagga 438
Query: 241 gctttgcattgttttt-gtttgtcactgcgtttggttcctttgtatatatatttatttcc 299
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 439 gctttgcattgttttttgtttgtcactgcgtttggttcctttgtagatatatttatttcc 498
Query: 300 cttgccagccccagctggagacagctctgctgtgcatgctcacc 343
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttggcagccccagctggagacagctctgctgtgcatgctcacc 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 744
Length adjustment: 9
Effective length of query: 336
Effective length of database: 735
Effective search space: 246960
Effective search space used: 246960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
