Query= MSMg01no156_f20.b1 MSMg01no156_f20.b1 CHROMAT_FILE:
MSMg01no156_f20.b1 PHD_FILE: MSMg01no156_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:28 2005
(311 letters)
>mm_chr1_75635302_75636012
Length = 711
Score = 563 bits (291), Expect = e-165
Identities = 303/307 (98%)
Strand = Plus / Plus
Query: 5 gaattccctcctctgatttttggcgtttagctctcttaggtgggcttgatgccgcattgg 64
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccacctctgatttttggcgtttagctctcttaggtgggcttgatgccgcattgg 264
Query: 65 gctcttctgaaccatcagaggcagtgaacactcatcagtagctcattagaaggctgtggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctcttctgaaccatcagaggcagtgaacactcatcagtagctcattagaaggctgtggt 324
Query: 125 ggtttgaacatatttagcccagggagtggcactattaggaggtgtggccttgttggagga 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtttgaatatatttagcccagggagtggcactattaggaggtgtggccttgttggagga 384
Query: 185 agtgtgtcactgtggaggtgggctttgagaccctcctcctagccacctggaagacagtct 244
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgtgtcattgtggaggtgggctttgagaccctcctcctagccacctggaagacagtct 444
Query: 245 gctcccggcttcctttggataaagatgttgaattctcacctctttcagcgccatgcctgc 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 gctcccggcttcctttggataaagatgttgaactctcacctctttcagcgccatgcctgc 504
Query: 305 ctggaca 311
|||||||
Sbjct: 505 ctggaca 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_f20.g1 MSMg01no156_f20.g1 CHROMAT_FILE:
MSMg01no156_f20.g1 PHD_FILE: MSMg01no156_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:28 2005
(294 letters)
>mm_chr1_75818242_75818935
Length = 694
Score = 499 bits (258), Expect = e-146
Identities = 279/290 (96%), Gaps = 8/290 (2%)
Strand = Plus / Minus
Query: 1 caggacagccagggctatacagagaaaccctggtcttgaaaaaccaaaaaaaaaaaaaaa 60
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 613 caggacagccagggctatacagagaaaccct-gtcttgaaaaacc-------aaaaaaaa 562
Query: 61 aaaaaaaaaaaaaaaagagttaccagtggtcatggtgtctcttcacagcaatagaaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaaaaaaaaaaaaagagttaccagtggtcatggtgtctcttcacagcaatagaaagct 502
Query: 121 gaactaaaacaggtcaggtaccagccagcagcttttctatttagtaatgtactccaagat 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaactaagacaggtcaggtaccagccagcagcttttctatttagtaatgtactccaagat 442
Query: 181 gctcaatcttaaatgagtttatgcctccctcatgaaaaggctattttcagtcactgcccc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcaatcttagatgagtttatgcctccctcatgaaaaggctattttcagtcactgcccc 382
Query: 241 ccatcttgaccccttaatatgtggcatcctcttatttcctgggtgatttt 290
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 ccatcttgaccccttaatatgtggcatcctcttatttcctgtgtgatttt 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
