Query= MSMg01no156_g11.b1 MSMg01no156_g11.b1 CHROMAT_FILE:
MSMg01no156_g11.b1 PHD_FILE: MSMg01no156_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:31 2005
(319 letters)
>mm_chr1_194723580_194724298
Length = 719
Score = 603 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Plus
Query: 4 ggaattcagcagtgttaacttaacatatgtatctgaaggaagaaaaccaacacaccacaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagcagtgttaacttaacatatgtatctgaaggaagaaaaccaacacaccacaa 263
Query: 64 atatcatttgaaacaaactgacagttttcttatgataaatgccaaaataaggtagttaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atatcatttgaaacaaactgacagttttcttatgataaatgccaaaataaggtagttaca 323
Query: 124 ctttataaggatatggtgtataccatgtttgatggaaactcaactaactcaattttgatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctttataaggatatggtgtataccatgtttgatggaaactcaactaactcaattttgatg 383
Query: 184 taaatgcttactaaatatataataagtacagagaatgctaagtaggctggaaatacttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taaatgcttactaaatatataataagtacagagaatgctaagtaggctggaaatacttgg 443
Query: 244 gtagtagtaatggcttagcctcactatttttctaggaatggaatttaaaggtatacctca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtagtagtaatggcttagcctcactatttttctaggaatggaatttaaaggtatacctca 503
Query: 304 taatccttcctt 315
||||||||||||
Sbjct: 504 taatccttcctt 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_g11.g1 MSMg01no156_g11.g1 CHROMAT_FILE:
MSMg01no156_g11.g1 PHD_FILE: MSMg01no156_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:32 2005
(482 letters)
>mm_chr1_194849961_194850843
Length = 883
Score = 766 bits (396), Expect = 0.0
Identities = 411/416 (98%), Gaps = 1/416 (0%)
Strand = Plus / Minus
Query: 1 tgtggatttccatcatactggg-aaaaaaataaaggtgcctcctcatctggtccacaaaa 59
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 416 tgtggatttccatcatactgggaaaaaaaatcaaggtgcctcctcatctggtccacaaaa 357
Query: 60 cagacttcaagtccagcatgtcttctacacaccatcagctcagaggtataaagtatctgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cagacttcaagtccagcatgtcttctacacaccatcagctcagaggtataaagtatctgt 297
Query: 120 ataaaaatgtatatgagaacttactcctggagacccgtgaatagagggactctgaagagg 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 296 ataaaaatgtatatgagaacttactcctggagacccatgaatagagggactctgaagagg 237
Query: 180 aattttgcaaattttcttaccttgtatatggtactcgtcttagttattttttgttatggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aattttgcaaattttcttaccttgtatatggtactcgtcttagttattttttgttatggt 177
Query: 240 gataaaatactcttgggaaagtagcttgaggggaaaagggctaattttggttcacagttc 299
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 176 gataaaatactcttgggaaagcagcttgaggggaaaagggctaattttgattcacagttc 117
Query: 300 catgtataggccatcatggctgggaagttatggaggcaggagcttgaaacatctggttac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 catgtataggccatcatggctgggaagttatggaggcaggagcttgaaacatctggttac 57
Query: 360 attgcatatgccatcagaaaacaggagatgactaatgtaccagctggctttctcct 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 attgcatatgccatcagaaaacaggagatgactaatgtaccagctggctttctcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space: 412056
Effective search space used: 412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
