Query= MSMg01no157_a07.b1 MSMg01no157_a07.b1 CHROMAT_FILE:
MSMg01no157_a07.b1 PHD_FILE: MSMg01no157_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:17 2005
(686 letters)
>mm_chr1_161551339_161552425
Length = 1087
Score = 1259 bits (651), Expect = 0.0
Identities = 675/683 (98%), Gaps = 1/683 (0%)
Strand = Plus / Minus
Query: 5 gaattcatgctttgttatctcatatataatatgctgcaaaacatacatttaatttcaatc 64
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 887 gaattcatgctttgggatctcatatataatatactgcaaaacatacatttaatttcaatc 828
Query: 65 ttcatagaatccaatgacagatgggaaaagagagagaagaatatcttttttgtagcttgc 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ttcatagaatccaatgagagatgggaaaagagagagaagaatatcttttttgtagcttgc 768
Query: 125 attgtatataaaacaaaaaataaaaaagttgtccacaagaatatcatacaatgcctctaa 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 767 attgtatataaaacaaaaaataaaaaaggtgtccacaagaatatcatacaatgcctctaa 708
Query: 185 gtgtcttcatagggaaggcactgtaatgtaaggatttatgtgctcaacagcatcctccat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gtgtcttcatagggaaggcactgtaatgtaaggatttatgtgctcaacagcatcctccat 648
Query: 245 cactcaccttgctataggatgtcataaagggcaaggggtttccctgtgggtaggagaagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 cactcaccttgctataggatgtcataaagggcaaggggtttccctgtgggtaggagaagg 588
Query: 305 ggctgatcagctgtgctgagactccttatacgcttttgtctttcagctacaatttaaaag 364
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 587 ggctgatcagctgtgctgagactccttatacacttttgtctttcagctacaatttaaaag 528
Query: 365 attaagg-aaaaaaaaatcagtctttcctaagtctgacactgaaataaaaaacaactttc 423
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 attaaggaaaaaaaaaaacagtctttcctaagtctgacactgaaataaaaaacaactttc 468
Query: 424 cactaatgtagccctttgttcatgaagctaggttacaaatggtttgctgcaggcactggg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cactaatgtagccctttgttcatgaagctaggttacaaatggtttgctgcaggcactggg 408
Query: 484 gttgtgctgagaatcctctctattaaacccagaggggagatgtgtgagtcagttattgac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gttgtgctgagaatcctctctattaaacccagaggggagatgtgtgagtcagttattgac 348
Query: 544 tgggaaagcctcatagctcaggttaaagaaatgagctatccaaggtgctgaagtccatca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tgggaaagcctcatagctcaggttaaagaaatgagctatccaaggtgctgaagtccatca 288
Query: 604 caccagaaaggaaatggaattttcatgctcaattcacttcagctccagacacttattgag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 caccagaaaggaaatggaattttcatgctcaattcacttcagctccagacacttattgag 228
Query: 664 aactaatatgtattaggtactgt 686
|||||||||||||||||||||||
Sbjct: 227 aactaatatgtattaggtactgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1087
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1077
Effective search space: 728052
Effective search space used: 728052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_a07.g1 MSMg01no157_a07.g1 CHROMAT_FILE:
MSMg01no157_a07.g1 PHD_FILE: MSMg01no157_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:17 2005
(657 letters)
>mm_chr1_161456210_161457266
Length = 1057
Score = 1178 bits (609), Expect = 0.0
Identities = 645/657 (98%)
Strand = Plus / Plus
Query: 1 actgtgaaacagtgggctctccctggggaagaatcagaaccaaccagacaacttgccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgaaacagtgggctctccctggggaagaatcagaaccaaccagacaacttgccatg 260
Query: 61 tcgctgatgcccagaaaccaagtgaagagctctctgtgctgatggtgacaagagtccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgctgatgcccagaaaccaagtgaagagctctctgtgctgatggtgacaagagtccctg 320
Query: 121 ggatgccagcctccaggatgaactgaagtcacatacccagtgttcacattccctttacct 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ggatgccagcctccaggatgaactgaagtcacatgcccagtgttcacattccctttacct 380
Query: 181 cagaatgccaggcagaggcccttttcctagagcactttgccataggtgtacgagtttgga 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 cagaatgccaggcagaggcccttttcctagagcaccttgccataggtgtacgagtttgga 440
Query: 241 tgtttgttcactttgctgacatgggacccttcatggggccaccttcattgagtcctctgt 300
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttgttcactttgctgacacaggacccttcatggggccaccttcattgagtcctctgt 500
Query: 301 ggtttgggatgtaggaggattaccaaggatcaggaaacagttggacttctatcacctaga 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 ggtttgggatgtaggaggattaccaagggtcaggaaacagttggacttctatcacctaga 560
Query: 361 ggagtgggaaatggtacaaactaactagacacataaagactctactttcccagaagcctc 420
|||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 561 ggagtgagaaatggtacaaactaactagacacataaaggctccactttcccagaagcctc 620
Query: 421 ttctctcacacctgccaggattctggagagaaggctactgcatactcacatctgtcttcc 480
|||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 ttctctcacacccgccagggttctggagagaaggctactgcatactcacgtctgtcttcc 680
Query: 481 cctcactgaacaaaagaaattctgctaggctgcttctgagacagagaaataagacattct 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 cctcactgaacaaaagaaattctgctaggctgcttctgagacagagaaatgagacattct 740
Query: 541 aggaaaagatggagggaaggatgaagccagcatcctgctttattctctgtaaatcactct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aggaaaagatggagggaaggatgaagccagcatcctgctttattctctgtaaatcactct 800
Query: 601 aagtgaccaccatttacctcacatgggtaaccgttcccttttgtaatagggatataa 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aagtgaccaccatttacctcacatgggtaaccgttcccttttgtaatagggatataa 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
