ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTTACACATTGCACAGGCACAAACATACACATATATTTTAAAAATAT
TAATGAAATAAGTGAAATTCCATAGTTACCACTAAATGATATATCGTATA
AAATGTATACTTTTAAGAAGCAATAGACAATAAAATACTCACTTAATTCT
ACAACAATGCTTGGTAAGAAATGATTCCATGCATCATTCACTTTGATTCT
ACAGATCTTTAGGTTCATTGTCAATTGGGCATTATGCTCTAAGCTTATTT
CAGCCTTTAATTTGCCAACTGCACCATCATGTTATAGGTGGGATGTTTGA
ATAGAGAAGTCACATACATCTCTGGTACTAAGATTTATTTTGAAAGCCCA
GAAAGCACCTGGGCATATCATGAGAGTATAGATCCCATGAATTTGAGCAA
ATGATACTAGGTCATGCAATATATCTACCTGCTTCTTTTGAGTTCAGTAT
TTACTTGTTTAAAACAAGTTAATGAGTCAAGAGCACCATTCATGTCCTGG
AAGAATATTCTCCACCACAGACCACTGGAAAATATATCAGTGTTTATCAA
ACGTCAATGTAGAATTAACTGTTATATTAATCTTGACATAATTTCTAACA
AATCAACGAAAGTGTTACTGCTTAATATTCTTAAATGCTGAAATATTTTC
TGGAAAATAAATGTAATGAATAAT

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCTGTTTAGCTCTTAATGCCATTTCTAAA
TTGGGTTATTTGAGGTTTTGGAGGTAGACTTCTTAAGTTCTTTATATAGT
TTGAATATTAGTTCTCTGTGAGATGTAGGGTTAATGAAGGGTTTTTTTCC
CCAATCTATAGGTTGCTAATTTGATGTATTGATGCTGTCTTCTGCCTTAT
AGAAACTGTTCAATTTCATGAGGTTCCATTTATCAATACTTGATTTTAGA
GCTTGAGCCACTAAAGTTCTCTTCAGAAAATGTCCTCCTGTGACAATGAG
TTCAAGGCTTTTTCTGACTTTCTCTTTTGTTTGATTCAGGGTATCTGGTT
TTATGTTGAGGTCCTTGATCTCCTTGAGGACTTGACCTTTGTGCAAGGTG
ATAAATATGGATCTATTTTCATTTTTCTACACATACACTGACAGAACAGC
ACCATTTATTGAAGATGCTTTCTTTTATCTGTTGAATATATTCTCAAAGA
TCAAGTGTGCATAAGTGTGGGACCATGAGAGACATCCTGGTTTCTGGTTG
AGCTAGGTTTAAAACCCCTGTGACCTAGCAAGAACAACCTGTAAGGGACA
GTAGGCGTTTTGCCCTGCTCCTAGAGACCAGTGACCTGACACAAGGCCTC
TCAGCTCTCCACAATTTT

Query= MSMg01no157_b08.b1 MSMg01no157_b08.b1 CHROMAT_FILE:
MSMg01no157_b08.b1 PHD_FILE: MSMg01no157_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:22 2005
         (660 letters)



>mm_chr1_111468050_111469109
          Length = 1060

 Score = 1247 bits (645), Expect = 0.0
 Identities = 654/657 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccttacacattgcacaggcacaaacatacacatatattttaaaaatattaatga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttacacattgcacaggcacaaacatacacatatattttaaaaatattaatga 263

                                                                       
Query: 64  aataagtgaaattccatagttaccactaaatgatatatcgtataaaatgtatacttttaa 123
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aataagtgaaattctatagttaccactaaatgatatatcgtataaaatgtatacttttaa 323

                                                                       
Query: 124 gaagcaatagacaataaaatactcacttaattctacaacaatgcttggtaagaaatgatt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaagcaatagacaataaaatactcacttaattctacaacaatgcttggtaagaaatgatt 383

                                                                       
Query: 184 ccatgcatcattcactttgattctacagatctttaggttcattgtcaattgggcattatg 243
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 384 ccatgcatcattcactttgattctacagatctttaggttcattgccaattgggcattatg 443

                                                                       
Query: 244 ctctaagcttatttcagcctttaatttgccaactgcaccatcatgttataggtgggatgt 303
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 444 ctctaagcttatttcagcctttaatttgccaactgcaccatcgtgttataggtgggatgt 503

                                                                       
Query: 304 ttgaatagagaagtcacatacatctctggtactaagatttattttgaaagcccagaaagc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgaatagagaagtcacatacatctctggtactaagatttattttgaaagcccagaaagc 563

                                                                       
Query: 364 acctgggcatatcatgagagtatagatcccatgaatttgagcaaatgatactaggtcatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acctgggcatatcatgagagtatagatcccatgaatttgagcaaatgatactaggtcatg 623

                                                                       
Query: 424 caatatatctacctgcttcttttgagttcagtatttacttgtttaaaacaagttaatgag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caatatatctacctgcttcttttgagttcagtatttacttgtttaaaacaagttaatgag 683

                                                                       
Query: 484 tcaagagcaccattcatgtcctggaagaatattctccaccacagaccactggaaaatata 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcaagagcaccattcatgtcctggaagaatattctccaccacagaccactggaaaatata 743

                                                                       
Query: 544 tcagtgtttatcaaacgtcaatgtagaattaactgttatattaatcttgacataatttct 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcagtgtttatcaaacgtcaatgtagaattaactgttatattaatcttgacataatttct 803

                                                                    
Query: 604 aacaaatcaacgaaagtgttactgcttaatattcttaaatgctgaaatattttctgg 660
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aacaaatcaacgaaagtgttactgcttaatattcttaaatgctgaaatattttctgg 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)