Query= MSMg01no157_b13.b1 MSMg01no157_b13.b1 CHROMAT_FILE:
MSMg01no157_b13.b1 PHD_FILE: MSMg01no157_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:23 2005
(691 letters)
>mm_chr1_153441839_153442929
Length = 1091
Score = 774 bits (400), Expect = 0.0
Identities = 430/442 (97%), Gaps = 4/442 (0%)
Strand = Plus / Minus
Query: 5 gaattcagccctggcataactcactgacaaaataacttcctaaatatggattgactggct 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaattcagccctggcagaactcactgacaaaataacttcctaaatatggattgactggct 383
Query: 65 tcaggagatgtgtccccctactactggggacatgggaaactgctcgtgcctttgctaaga 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcaggagatgtgtgttcctactactggggacatgggaaactgctcgtgcctttgctaaga 323
Query: 125 gcattcacgaatggagcaacttttaatgacctttaagttccctcccaaaagggcaagcag 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 322 gcattcacgaatggagcaacttttagtgacctttaagttccctcccaaaagggcaagcag 263
Query: 185 gtgatgcttactcctctaccatgatctcttaggaccataggccattttcacaaatgtcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtgatgcttactcctctaccatgatctcttaggaccataggccattttcacaaatgtcct 203
Query: 245 ggggagatggctcagtcaacaaagtgcttgctctgcaaacagaaggagctgaagtggatt 304
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggggagatggctcagtcagcaaagtgcttgctctgcaaacagaaggagctgaagtggatt 143
Query: 305 ccccagatcccatgtaaaatagacaaacaaaaaacaacaacaaaccaacaaagcataggg 364
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 142 ccccagatcccatgtaaaatagacaaa----aaacaacaacaaaccaacaaagcataggg 87
Query: 365 cacaatcccataaccccagcctggggggcggggggcaggtccctggggctcattggtcat 424
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 86 cacaatcccataaccccagcctggggggcggggggtaggtccctggggctcattggtcat 27
Query: 425 caagcacctaccctagctgcag 446
||||||||||||| ||||||||
Sbjct: 26 caagcacctaccccagctgcag 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_b13.g1 MSMg01no157_b13.g1 CHROMAT_FILE:
MSMg01no157_b13.g1 PHD_FILE: MSMg01no157_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:23 2005
(287 letters)
>mm_chr1_153342260_153342946
Length = 687
Score = 547 bits (283), Expect = e-160
Identities = 286/287 (99%)
Strand = Plus / Plus
Query: 1 aatgcaattactggcatggagacatatatccttttaaaaagtaaataattgagttctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgcaattactggcatggagacatatatccttttaaaaagtaaataattgagttctaaa 260
Query: 61 tcaatatgttctctggtggagaaaacaggcagagagtcaaagcaaagcactctatagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaatatgttctctggtggagaaaacaggcagagagtcaaagcaaagcactctatagaat 320
Query: 121 ctatacatttcacaatggctagctgggtaacagttattaatacaataagggaagaaagga 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 ctatacatttcacaatggctagctgggtaacagttatcaatacaataagggaagaaagga 380
Query: 181 gagctggtaaaatgtcaaaaacaaatgaggaatttgttttccagaaataacatcaattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagctggtaaaatgtcaaaaacaaatgaggaatttgttttccagaaataacatcaattaa 440
Query: 241 gaagaaggtaagaagccgggcgtggtggcgcaggcctttaatcccag 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagaaggtaagaagccgggcgtggtggcgcaggcctttaatcccag 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
