Query= MSMg01no157_g05.b1 MSMg01no157_g05.b1 CHROMAT_FILE:
MSMg01no157_g05.b1 PHD_FILE: MSMg01no157_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:43 2005
(317 letters)
>mm_chr1_185617567_185618283
Length = 717
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 4 ggaattcatgacactttgaagcctttgcttaaaccaggcatggccatccagcagagaggc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatgacactttgaagcctttgcttaaaccaggcatggccatccagcagagaggc 263
Query: 64 cctcctgtttgcaaggagcagatgctggcagatgtctagtgagctcagcactcggctgca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctcctgtttgcaaggagcagatgctggcagatgtctagtgagctcagcactcggctgca 323
Query: 124 gcttctgttccacccccacggtgcccaggagataagataaaattgttagtacgtgagatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcttctgttccacccccacggtgcccaggagataagataaaattgttagtacgtgagatt 383
Query: 184 tgtgacagcctctgggctccaggacttcccatgtctttatcatcaggtctgtttagaaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgacagcctctgggctccaggacttcccatgtctttatcatcaggtctgtttagaaag 443
Query: 244 aaaaacattttgaggtgtccccgcggaacagggttgtttcaaaagtggcatatggtgaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaaacattttgaggtgtccccgcggaacagggttgtttcaaaagtggcatatggtgaaa 503
Query: 304 tgttacacgagctt 317
||||||||||||||
Sbjct: 504 tgttacacgagctt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_g05.g1 MSMg01no157_g05.g1 CHROMAT_FILE:
MSMg01no157_g05.g1 PHD_FILE: MSMg01no157_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:43 2005
(290 letters)
>mm_chr1_185740859_185741548
Length = 690
Score = 518 bits (268), Expect = e-151
Identities = 283/288 (98%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 atttttcttttggccccaaggtcacaatcatcaggccttcaaagttcagacctctgtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atttttcttttggccccaaggtcacaatcatcaggccttcaaagttcagacctctgtaag 428
Query: 61 ggacttttttgacaagcatctgagattagggcttcttcgcctctgaacaaaaagcagatc 120
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 427 ggacttttttgacaatcatctgagattagtgcttcttcgcctctgaacaaaaagcagatc 368
Query: 121 tcctgattcaccaaagtatagcttcagagaaaatccacccatgcattaagaattaacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tcctgattcaccaaagtatagcttcagagaaaatccacccatgcattaagaattaacatg 308
Query: 181 cctctgatttgtcactgggatgaactcttgatgagcaagctcgagtctgacccagataac 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 307 cctctgatttgtcactgggatgaactcttgatgagcaagcttgagtctgacccagataac 248
Query: 241 ccactagaaacacaaacaggatgtgaggtaaa-ctgagattgctagaa 287
|||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 247 ccactagaaacacaaacaggatgtgagg-aaagctgagattgctagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
