Query= MSMg01no157_o02.b1 MSMg01no157_o02.b1 CHROMAT_FILE:
MSMg01no157_o02.b1 PHD_FILE: MSMg01no157_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:19 2005
(349 letters)
>mm_chr1_185672598_185673346
Length = 749
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%)
Strand = Plus / Minus
Query: 1 acaaggtttattaacacccccttgccctatatcttgtcagctgtttcagtcattaaacta 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 425 acaaggtttattaacacccccttgccctatatcttgttagctgtttcagtcattaaacta 366
Query: 61 tagagcagagaatttgagatagcacgagttatgccattgtcttcccaaaaaatagattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tagagcagagaatttgagatagcacgagttatgccattgtcttcccaaaaaatagattaa 306
Query: 121 aggcctaacattttggttctcacttaagccataatttcttgatgtctttagagctgagtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 305 aggcctaacattttggttctcacttaagccataatttcttgatgtctttagagctgggtt 246
Query: 181 tacctatcttgttttaggattttcttggtttgatttggtttggccttgttgtaagacaag 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 245 tacctatcttgttttaggattttcttggtttgatttggtttggccatgttgtaagacaag 186
Query: 241 ttcttgttatacatcctgacatggtttgaactcaggatcctcacacctcagcctcagatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttcttgttatacatcctgacatggtttgaactcaggatcctcacacctcagcctcagatg 126
Query: 301 tctgaaattacacaggtccacatccatgcataaccaaccatcat 344
|||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 125 tctggaattacacaggttcacatccatgcataaccaaccatcat 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_o02.g1 MSMg01no157_o02.g1 CHROMAT_FILE:
MSMg01no157_o02.g1 PHD_FILE: MSMg01no157_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:19 2005
(288 letters)
>mm_chr1_185507442_185508129
Length = 688
Score = 507 bits (262), Expect = e-148
Identities = 278/286 (97%), Gaps = 6/286 (2%)
Strand = Plus / Plus
Query: 1 tgtagtttctttcacaaacctgccctcatatctttctagatctcaagtgaaagcaacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtagtttctttcacaaacctgccctcatatctttctagatctcaagtgaaagcaacttc 260
Query: 61 atccttcttaatgccccagatgaaaactctacatccccgccttggactgatatc---ttg 117
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 261 atccttcttaatgccccagatgaaaactctacatccccgccttggactaatatcatcttg 320
Query: 118 agtttttcatagtctatttggctgaaagttgcatcattaggtttttcccttgatctctct 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtttttcatagtctatttggctgaaagttgcatcattaggtttttcccttgatctctct 380
Query: 178 gatttttattaatgttgagttcactaataagtagtttgtagttggttcatctagttactt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatttttattaatgttgagttcactaataagtagtttgtagttggttcatctagttactt 440
Query: 238 tatagccttttttttttttttaaatctagttggcctgccagccttc 283
|||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 441 tatagc---ttttttttttttaaatctagttggcctgccagtcttc 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
