XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTCT
TTATGTCCTCTACCATCATCATGAGATATGCTTTTAAATCCAGGTCTACC
TTTTCAGGTGTGTCAGGGTGTCCTGGATTGGGCGAAGTGGGCGTTCTGGG
TTCTGATGATGGTGAGTGGTCCTGGCTTCTGTTAGTAGGATTCTTACGTT
TACCTTTCGCCATCTGGCAATCTCTGGAGTTAGTTGTTATAGTTGTCTTT
GTTAAGAGATTGTTCCTCCGTGGGAGACAAGCTCTCTTCTCTGAGTTTCA
GTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAAGGTGT
ATCTGTTATCTGGCGCCTGGACCTCCTCCTGGCTGAAGGTGAAGGCCCAA
AACAGCACCCTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCAG
TTGTCTGGAGTCGAAGATGTTGCAGCCTCAGAAGCTCTGTGGCTCTTGTC
CGGAAGGAGGCCGGCCGTCTGGAGCTGAGGTTGGCGCCGCCTCAGAAGCT
CTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGAAGATGGCG
CCGCCCCAGAATCTCTGTGACTCTCTCGCCCGTTCCAGAAACGGCTGGCA
CTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCG
TAGCTCAGAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCAAGGAACATTCTCTTTTTCTGTTATGAGCACACTC
CTGAGAGTTCACTACTATATCTACAATGCCAGTGACCTGGAACACAGCTG
TTAGGTACATACTAGAATGAGTAATATTTCTTTCTCAGAACTGATTTTTA
CTGTCTTATTATTGTAAACTCTATTTAATGCAATCTGTGGTTTGTTTCAG
TGATGACATATTGGCGGATATTTTCAGACTATAATAGACAGGCTAAACTT
GGTCCTGAGATTGTCCCATTAAGGGCAGGAGGTACATCTCCCCAGGCTGA
CCTTCCGGGTCAATGCAAATCCTGCCTTAGCCACCTTATTTCTCTGAGCA
GCTCCCGAATGCCAATGATGTCTGAGTTTCTACTGGCCCCATAATTGCTC
ATCCAGCTGTCAAGCTTATTTTCTGAGAAAGACAGAGTTCTTGTGGCAAA
TTCTGGCATATTGGATGGGTTTCAGAAGCCTGTCAACAAACCAGCTAAGA
AACGGAAAACAGCCCAAACTTGAATTCCCAAGTGGGCTGAAACACAACTC
CTTGNAGGAGTTTGTGTCTCAGAATCAGAAAGCTGAAGGTCAATGCTGAC
AGGAGAAACTTCTGACCCACACTGAGGCAATCAGTCCCACTTGGACTCTT
TAACTACTCAA

Query= MSMg01no158_c09.g1 MSMg01no158_c09.g1 CHROMAT_FILE:
MSMg01no158_c09.g1 PHD_FILE: MSMg01no158_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:38 2005
         (558 letters)



>mm_chr1_117972206_117973163
          Length = 958

 Score = 1027 bits (531), Expect = 0.0
 Identities = 551/558 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaggaacattctctttttctgttatgagcacactcctgagagttcactactatatctac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 caaggaacattctctttttctgttatgagcacactcctgagagttcactactatatctac 699

                                                                       
Query: 61  aatgccagtgacctggaacacagctgttaggtacatactagaatgagtaatatttctttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 aatgccagtgacctggaacacagctgttaggtacatactagaatgagtaatatttctttc 639

                                                                       
Query: 121 tcagaactgatttttactgtcttattattgtaaactctatttaatgcaatctgtggtttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tcagaactgatttttactgtcttattattgtaaactctatttaatgcaatctgtggtttg 579

                                                                       
Query: 181 tttcagtgatgacatattggcggatattttcagactataatagacaggctaaacttggtc 240
           ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 578 tttcagtgatgacatattggcagatattttcagactataatagataggctaaacttggtc 519

                                                                       
Query: 241 ctgagattgtcccattaagggcaggaggtacatctccccaggctgaccttccgggtcaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctgagattgtcccattaagggcaggaggtacatctccccaggctgaccttccgggtcaat 459

                                                                       
Query: 301 gcaaatcctgccttagccaccttatttctctgagcagctcccgaatgccaatgatgtctg 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 458 gcaaatcctgccttagccaccttatttctctgagcagctccagaatgccaatgatgtctg 399

                                                                       
Query: 361 agtttctactggccccataattgctcatccagctgtcaagcttattttctgagaaagaca 420
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agtgtctactggccccataattgctcatccagctgtcaagcttattttctgagaaagaca 339

                                                                       
Query: 421 gagttcttgtggcaaattctggcatattggatgggtttcagaagcctgtcaacaaaccag 480
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 338 gagttcttgtggcaaattctggcatattggataggtttcagaagcctgtcaacaaaccag 279

                                                                       
Query: 481 ctaagaaacggaaaacagcccaaacttgaattcccaagtgggctgaaacacaactccttg 540
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 278 ctaagaaacggaaaacagcccaaacttgaattcccaagtgggctaaaacacaactccttg 219

                             
Query: 541 naggagtttgtgtctcag 558
            |||||||||||||||||
Sbjct: 218 gaggagtttgtgtctcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space:   519504
Effective search space used:   519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)