Query= MSMg01no158_i09.b1 MSMg01no158_i09.b1 CHROMAT_FILE:
MSMg01no158_i09.b1 PHD_FILE: MSMg01no158_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:03 2005
(239 letters)
>mm_chr1_23123157_23123795
Length = 639
Score = 435 bits (225), Expect = e-126
Identities = 234/237 (98%)
Strand = Plus / Plus
Query: 1 ataagcccacactggaaattctgaacttgaccttaaatttccttgtttctgaaaagttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagcccacactggaaattctgaacttgaccttaaatttccttgtttctgaaaagttag 260
Query: 61 tcctgtacttcattgatggtcaactatggcgcaatgatgtgtagattctgaacgctgtaa 120
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctgtacgtcattgatggtcaactgtggcgcaatgatgtgtagattctgaacgctgtaa 320
Query: 121 gtttttatagctaagaacatgagcacctggattcaaaggtcatcaagtaatactagataa 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 gtttttatagctaagaacatgagcacctggattcaaaggtcatcaagtaacactagataa 380
Query: 181 atactttcagagagctatagatatgtacttttccagaaccacttatttatgtccaca 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atactttcagagagctatagatatgtacttttccagaaccacttatttatgtccaca 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_i09.g1 MSMg01no158_i09.g1 CHROMAT_FILE:
MSMg01no158_i09.g1 PHD_FILE: MSMg01no158_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:03 2005
(293 letters)
>mm_chr1_23277947_23278638
Length = 692
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 cactcccattctctaatgaaaataaatgaggaaaacggaaggttaagctctatcagtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cactcccattctctaatgaaaataaatgaggaaaacggaaggttaagctctatcagtcac 431
Query: 61 tacttttcctgaagtaattcaaaacccttctgagtctagtgaaagattaagctggtacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tacttttcctgaagtaattcaaaacccttctgagtctagtgaaagattaagctggtacag 371
Query: 121 agaagtgggtgtgccttcccctgagatttggttttagatgaagttaccacaattttagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agaagtgggtgtgccttcccctgagatttggttttagatgaagttaccacaattttagtt 311
Query: 181 gccaacgccttagggattttatgattaaaaaaaaaaaatccccacagagagcttcatgtt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 310 gccaacgccttagggattttatgattaaaaaaaaaaa-tccccacagagagcttcatgtt 252
Query: 241 tgtggaaactaacaaatgtgatgagctccataaatttctttttcaaagcaa 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgtggaaactaacaaatgtgatgagctccataaatttctttttcaaagcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
