Query= MSMg01no159_f05.b1 MSMg01no159_f05.b1 CHROMAT_FILE:
MSMg01no159_f05.b1 PHD_FILE: MSMg01no159_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:02 2005
(319 letters)
>mm_chr1_182811857_182812575
Length = 719
Score = 482 bits (249), Expect = e-140
Identities = 295/315 (93%), Gaps = 9/315 (2%)
Strand = Plus / Minus
Query: 4 ggaattcaatttgtagaccagactgcctcgaactcagaaatccgcctgcctctgcctccc 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ggaattcaatttgtagaccaaactgcctcgaactcagaaatccgcctgcctctgcctccc 644
Query: 64 aagtgctggttatttcaaggcctgagccaccactgcccggtgatcccatgagtttaaggc 123
||||||||| |||| |||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 643 aagtgctgg-gatttaaaggtgtgtgccaccactgcccggtggtcccatgagtttaaggc 585
Query: 124 tagacagcctgggctacagagtgagtttttggatcagactctgatggtgaagaataagta 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 584 tagacagcctgggctacagagtgagtttttggatcagactctgatggtaaagaataaata 525
Query: 184 aagcaacctgctgtcctgctgtccttctgtctcagtgtggacagacatgcgccacacacc 243
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aagcaa--------cctgctgtccttctgtctcagtgtggacagacatgcgccacacacc 473
Query: 244 cagctctgtctattccaagaatgtttttaaaaaacattttaaaagatttattttcttaat 303
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 472 cagctctgtctattccaagtatgtttttaaaaaacatttaaaaagatttattttcttaat 413
Query: 304 tatgtatatgtttgt 318
|||||||||||||||
Sbjct: 412 tatgtatatgtttgt 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_f05.g1 MSMg01no159_f05.g1 CHROMAT_FILE:
MSMg01no159_f05.g1 PHD_FILE: MSMg01no159_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:02 2005
(287 letters)
>mm_chr1_182688398_182689081
Length = 684
Score = 532 bits (275), Expect = e-155
Identities = 283/287 (98%), Gaps = 3/287 (1%)
Strand = Plus / Plus
Query: 1 agaaatccgcctgcctctgccttgcgagtgctggaattaaaggcatgaatgggaactatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaatccgcctgcctctgccttgcgagtgctggaattaaaggcatgaatgggaactatg 260
Query: 61 ggaactttgcattttctctgagaagcaaatggccacagaagtagctgctgatgctctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaactttgcattttctctgagaagcaaatggccacagaagtagctgctgatgctctggt 320
Query: 121 aaagagtgcaagggctgtgtggtccaaatcagtaatggaaatgacagacaagacttcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagagtgcaagggctgtgtggtccaaatcagtaatggaaatgacagacaagacttcccc 380
Query: 181 atgaagcaaggcttcttgactcagagagtatctgctgttgagtaaggggcatgcttgctg 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 atgaagcaaggcttcttgactcagagagtacctgctgttgagtaaggggcatgcttgctg 440
Query: 241 tggaccaaggagaactggagaggggggggggcaagtctgtctgtgaa 287
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tggaccaaggagaactggagaggggggg---caagtctgtctgtgaa 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 684
Length adjustment: 9
Effective length of query: 278
Effective length of database: 675
Effective search space: 187650
Effective search space used: 187650
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
