Query= MSMg01no159_h07.b1 MSMg01no159_h07.b1 CHROMAT_FILE:
MSMg01no159_h07.b1 PHD_FILE: MSMg01no159_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:11 2005
(687 letters)
>mm_chr1_64344259_64345345
Length = 1087
Score = 1060 bits (548), Expect = 0.0
Identities = 548/548 (100%)
Strand = Plus / Minus
Query: 4 ggaattccttctgcgtggagtcctctacacgcttagatttcgtggctgtgattatcttcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ggaattccttctgcgtggagtcctctacacgcttagatttcgtggctgtgattatcttcc 489
Query: 64 caccagctcctcgatctctctgaacttcaaccattcttctaatttcaacagctttctatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 caccagctcctcgatctctctgaacttcaaccattcttctaatttcaacagctttctatt 429
Query: 124 ctgtaacaaatacccaaacgatcaacttataacaagagagaaaaacaaacattttgcatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctgtaacaaatacccaaacgatcaacttataacaagagagaaaaacaaacattttgcatc 369
Query: 184 atggtagtggatgccttggtccacatttggctcttgttttgaacctatgatggtgcactt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atggtagtggatgccttggtccacatttggctcttgttttgaacctatgatggtgcactt 309
Query: 244 cattgtggcaggaagagaggtgtcagtgccttagatttttctcgatgttcacaatttgaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cattgtggcaggaagagaggtgtcagtgccttagatttttctcgatgttcacaatttgaa 249
Query: 304 gaccagataggataggtggagtaccttataagagcctccgctactgtactttgtaagata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gaccagataggataggtggagtaccttataagagcctccgctactgtactttgtaagata 189
Query: 364 ttccgctgttagaatttgcctaatgctttcccattaggacattccagcaagctagaggaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttccgctgttagaatttgcctaatgctttcccattaggacattccagcaagctagaggaa 129
Query: 424 gccacagaggtgaacaccatctttgcctcagcatatgaagggcagcatcagcagctcatc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gccacagaggtgaacaccatctttgcctcagcatatgaagggcagcatcagcagctcatc 69
Query: 484 acttcggagctcagtcttgatgactcggctgaggtagtgcttgctaggtttcccatcatt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 acttcggagctcagtcttgatgactcggctgaggtagtgcttgctaggtttcccatcatt 9
Query: 544 aacttgcc 551
||||||||
Sbjct: 8 aacttgcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_h07.g1 MSMg01no159_h07.g1 CHROMAT_FILE:
MSMg01no159_h07.g1 PHD_FILE: MSMg01no159_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:11 2005
(289 letters)
>mm_chr1_64221106_64221795
Length = 690
Score = 545 bits (282), Expect = e-160
Identities = 288/290 (99%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 ataaacctgctcagcagccgggcccaattctcctgaatacctttttgagttatcaaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaacctgctcagcagccgggcccaattctcctgaatacctttttgagttatcaaagct 260
Query: 61 ccaggaccaccaggaacactgctgatcctgcaaaactgcatttattaaactcgctgagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggaccaccaggaacactgctgatcctgcaaaactgcatttattaaactcgctgagca 320
Query: 121 agagaaagcagcaccttggcagagtctcagcactctccagaggggaagaaggagggggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagaaagcagcaccttggcagagtctcagcactctccagaggggaagaaggagggggac 380
Query: 181 gtgtcacgtctatcggctgtagagtgggcacaaggtggtctgtgcagagcttataatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtcacgtctatcggctgtagagtgggcacaaggtggtctgtgcagagcttataatagg 440
Query: 241 cggaactgggcaaggggggggg-tctgcatttgtaatgagaaaagcttct 289
|||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 441 cggaactgggcaaggggggggggtctgcatttgtaatgagaagagcttct 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
