Query= MSMg01no161_n06.b1 MSMg01no161_n06.b1 CHROMAT_FILE:
MSMg01no161_n06.b1 PHD_FILE: MSMg01no161_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:53 2005
(421 letters)
>mm_chr1_72303543_72304362
Length = 820
Score = 679 bits (351), Expect = 0.0
Identities = 375/383 (97%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 39 acttggggtagagggttgaggaggagtatgcaaatccttgaagcgtatgaaaagaatagc 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 acttggggtagagggttgaggaggagtatgcaaatccttgaagcgtatgaaaagaatagc 761
Query: 99 cagccgtgcaggagggcttaggtgaagccttcccctatccgacacactcgggtctaatag 158
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 760 cagccgtgcgggagggcttaggtgaagccttcccctatccgacacactcaggtctaatag 701
Query: 159 agtggtcaccactgtgactccatgcaaggcagagaagtaactgtgttgtactactgctca 218
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 agtggtcaccactgtgattccatgcaaggcagagaagtaactgtgttgtactactgctca 641
Query: 219 tagaactttctagaattccattgtagtgtgctaaggacaactgaatgtgcacaatgtctc 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tagaactttctagaattccattgtagtgtgctaaggacaactgaatgtgcacaatgtctc 581
Query: 279 agcagaggactctgctacgctaccctacggaggtgcacgcacagcaatcttggtactgtc 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agcagaggactctgctacgctaccctacggaggtgcacgcacagcaatcttggtactgtc 521
Query: 339 ggctctgtggaagtctcttgcccctctgcactgttaattcaaacccacctcctcttacat 398
||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 520 ggctctgtggaagtctcttgcccctctgcactgagaa-gccaacccacctcctcttacat 462
Query: 399 ctgcagttctcaacctgtggatc 421
|||||||||||||||||||||||
Sbjct: 461 ctgcagttctcaacctgtggatc 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_n06.g1 MSMg01no161_n06.g1 CHROMAT_FILE:
MSMg01no161_n06.g1 PHD_FILE: MSMg01no161_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:53 2005
(381 letters)
>mm_chr1_72194477_72195255
Length = 779
Score = 679 bits (351), Expect = 0.0
Identities = 373/381 (97%), Gaps = 2/381 (0%)
Strand = Plus / Plus
Query: 1 cctaatgtgctttaaatcaggcctgcaaactcacttggtggtttctctgttcttggtaac 60
|||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 201 cctaatgtgctttaaatcaggcctgcaaactcactttgtggtctctctattcttggtaat 260
Query: 61 gggagaccccagcatgctggacttctgcagaataaaacactctttgcatttacatactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggagaccccagcatgctggacttctgcagaataaaacactctttgcatttacatactat 320
Query: 121 ctgagtcccgggtatcattctgcggagaattactggactctactcaagaaaacaaaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgagtcccgggtatcattctgcggagaattactggactctactcaagaaaacaaaaata 380
Query: 181 gaacagctgacaaatgaaagattgtatacatcacaaaactgctcccattaacctgctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacagctgacaaatgaaagattgtatacatcacaaaactgctcccattaacctgctttg 440
Query: 241 gatacaccatccctgtgcataggctcatatgaacatttgagttcaaagccctcgaccaaa 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatacaccatccctgtgcacaggctcatatgaacatttgagttcaaagccctcgaccaaa 500
Query: 301 attttgcagttaggattaaaaaaaaaaagtatatacaaacttcaaatctccccataaaga 360
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 attttgcagttaggat--aaaaaaaaatgtatatacaaacttcaaatctccccataaaga 558
Query: 361 aaaactgaaacctccaaaatt 381
|||||||||||||||||||||
Sbjct: 559 aaaactgaaacctccaaaatt 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 779
Length adjustment: 9
Effective length of query: 372
Effective length of database: 770
Effective search space: 286440
Effective search space used: 286440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
