Query= MSMg01no162_d11.b1 MSMg01no162_d11.b1 CHROMAT_FILE:
MSMg01no162_d11.b1 PHD_FILE: MSMg01no162_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:32 2005
(320 letters)
>mm_chr1_77639820_77640537
Length = 718
Score = 580 bits (300), Expect = e-170
Identities = 310/314 (98%), Gaps = 2/314 (0%)
Strand = Plus / Plus
Query: 5 gaattctgccaatgtagaatatgtatcagacccatgggctggagctgaagggcctgggct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgccaatgtagaatatgtatcagacccatgggctggagctgaagggcctgggct 264
Query: 65 gggctgtgtgaaggaggtgtctgaagagtctcatcagaactcctcactcagcatggcgac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggctgtgtgaaggaggtgtctgaagagtctcatcagaactcctcactcagcatggcgac 324
Query: 125 acacagggtttgatggcgagttctgtctattgttgaaaatcaggcgacatcaccaaaaaa 184
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 acacagggtgtgatggcgagttctgtctattgttgaaaatcaggtgacatcaccaaaaaa 384
Query: 185 tcccttacaacccatcacttatgccactgataggacataggagatcatcaagatcagatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcccttacaacccatcacttatgccactgataggacataggagatcatcaagatcagatt 444
Query: 245 tctttttataacaatatgttttgtctgttatgtgtagcctttgtggttattttataaaag 304
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctttttataacaat--gttttgtctgttatgtgtagcctttgtggttattttataaaag 502
Query: 305 cacagggtgggtca 318
||||||||||||||
Sbjct: 503 cacagggtgggtca 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_d11.g1 MSMg01no162_d11.g1 CHROMAT_FILE:
MSMg01no162_d11.g1 PHD_FILE: MSMg01no162_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:32 2005
(302 letters)
>mm_chr1_77773040_77773741
Length = 702
Score = 551 bits (285), Expect = e-161
Identities = 297/301 (98%)
Strand = Plus / Minus
Query: 1 ttctttatagtttgtgatattaggagctagggtatgatttatatttcttcaatttttctg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 ttctttatagtttgtgatattaggagctagggtatggtttatatttcttcaatttttctg 442
Query: 61 gattgtagatgatgcagaaattaagaaaatacttctgatgacatctcataaagaaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattgtagatgatgcagaaattaagaaaatacttctgatgacatctcataaagaaaagga 382
Query: 121 cagggactgaaatattttacagaattctcttgctctaattttgaagaatgagatcagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggactgaaatattttacagaattctcttgctctaattttgaagaatgagatcagtac 322
Query: 181 tctgtaatgaatttaaggatggtagaatattctatcagaccggagagccctagaaacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tctgtaatgaatttaaggatggtagaatattctatcagaccggagagccttagaaacttc 262
Query: 241 tgcagaatgtgtctcaggcatttcaacagaagccaaaggcagagatgatattttctactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tgcagaatgtgtctcaggcatttcaacagaagccaaaggcagagatgatatagtctactc 202
Query: 301 a 301
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
