Query= MSMg01no163_e06.b1 MSMg01no163_e06.b1 CHROMAT_FILE:
MSMg01no163_e06.b1 PHD_FILE: MSMg01no163_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:50 2005
(307 letters)
>mm_chr1_168571455_168572162
Length = 708
Score = 572 bits (296), Expect = e-168
Identities = 302/304 (99%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 5 gaattctacagggaaaagg-ataaaatgtcctagagctcagactttgttctttgtttcct 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaattctacagggaaaaggaataaaatgtcctagagctcagactttgttctttgtttcct 449
Query: 64 agacaaacgtgtgcaatataaagaagcgccctgacttttcatcctctggtcaatgggatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agacaaacgtgtgcaatataaagaagcgccctgacttttcatcctctggtcaatgggatg 389
Query: 124 tggtagtagagaccgaggagatgcagaaaacctacatatttgatgggataatggtttgca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tggtagtagagaccgaggagatgcagaaaacctacatatttgatgggataatggtttgca 329
Query: 184 gtggtcactacactgagaagtactttcctttacaagactttgaaggtatctctctaatgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtggtcactacactgagaagtactttcctttacaagactttgaaggtatctctctaatgt 269
Query: 244 gtgtgtgagaaaaaacttaggatgctacttattttaatgcctctcctgtaataggcactg 303
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 268 gtgtgtgagaaaaaacttaggatgctacatattttaatgcctctcctgtaataggcactg 209
Query: 304 gaag 307
||||
Sbjct: 208 gaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 708
Length adjustment: 9
Effective length of query: 298
Effective length of database: 699
Effective search space: 208302
Effective search space used: 208302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_e06.g1 MSMg01no163_e06.g1 CHROMAT_FILE:
MSMg01no163_e06.g1 PHD_FILE: MSMg01no163_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:50 2005
(275 letters)
>mm_chr1_168433454_168434127
Length = 674
Score = 497 bits (257), Expect = e-145
Identities = 269/273 (98%), Gaps = 1/273 (0%)
Strand = Plus / Plus
Query: 1 tggtacttaggagctgtatttctacttgaggcaaagagtggttgaaaccaaatgaagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtacttaggagctgtatttctacttgaggcaaagagtggttgaaaccaaatgaagcag 260
Query: 61 aagtgtagaagagaagacaggaggaataattgcttctactaaccacaactcttttgatgt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 aagtgtagaagagaagacaggaggaataattgcttctactaaccacaa-tcttttgatgt 319
Query: 121 ctctggggacaccagaagccagaggaagggcagtccaactcacagtctttgcaaaggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctctggggacaccagaagccagaggaagggcagtccaactcacagtctttgcaaaggaag 379
Query: 181 tgttgtcctttccctggattgagtcgagtctgctttgtggttgtttttttctgcctttga 240
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 380 tgttgtcctttccttggattgagtcaagtctgctttgtggttgtttttttctgcctttga 439
Query: 241 ttcctcggtctaagttgcttattatcaaaagag 273
||||| |||||||||||||||||||||||||||
Sbjct: 440 ttccttggtctaagttgcttattatcaaaagag 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 674
Length adjustment: 9
Effective length of query: 266
Effective length of database: 665
Effective search space: 176890
Effective search space used: 176890
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
