Query= MSMg01no163_h18.b1 MSMg01no163_h18.b1 CHROMAT_FILE:
MSMg01no163_h18.b1 PHD_FILE: MSMg01no163_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:05 2005
(354 letters)
>mm_chr1_160130291_160131044
Length = 754
Score = 609 bits (315), Expect = e-179
Identities = 345/355 (97%), Gaps = 2/355 (0%)
Strand = Plus / Plus
Query: 1 aatcctaaatatcaaaaatgcttctgaagaacatggcccctttgtgacattcttt-cttt 59
|||||||||||||||||||||||||||||||||||| |||| |||||||| |||| ||||
Sbjct: 201 aatcctaaatatcaaaaatgcttctgaagaacatggtccctatgtgacat-cttttcttt 259
Query: 60 taaatgcaactcatcaactgtgcaatagtactagagctatgagttcagtccatcacagta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 260 taaatgcaactcatcaactgtgcaatagtactagagctatgagttcagtccattacagta 319
Query: 120 gagaatctaaaaactgtgctccattttctccaatattctcattggttcaaatgaggtgga 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 320 gagaatctaaaaactgtgctccattttctccaatattctcactggttcaaatgaggtgga 379
Query: 180 agtggatacagacagacacaaaataggataaagttgacagtgtttcccaggccaaagaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 380 agtggatacagacagacacaaaataggataaagttgacagtgtttcccaggtcagagaag 439
Query: 240 atgccagtgtggatgactattctgaaaggctgagtctgaagttagcaagagaaaggggag 299
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 atgccagtgtggatgcctattctggaaggctgagtctgaagttagcaagagaaaggggag 499
Query: 300 gccattcctcatgtggaaaatgtgctgagcacaagtagaaatcagagctaaccta 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gccattcctcatgtggaaaatgtgctgagcacaagtagaaatcagagctaaccta 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_h18.g1 MSMg01no163_h18.g1 CHROMAT_FILE:
MSMg01no163_h18.g1 PHD_FILE: MSMg01no163_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:05 2005
(284 letters)
>mm_chr1_160260104_160260787
Length = 684
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Minus
Query: 1 actcattgtttacaagaaataaacccacttatctttcctgaaaattattatttaagagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 actcattgtttacaagaaataaacccacttatctttcctgaaaattattatttaagagcc 423
Query: 61 aaaattacagtctatagatttagagcaaaacttacttctttccctcacgcttgtgcagag 120
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 422 aaaattacaatctatagatttagagcaaaacttacttctttccctcatgcttgtgcagag 363
Query: 121 tactcacctctaggttgtgctggtttgaaattttcaattaagccgaccaaaggcaaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tactcacctctaggttgtgctggtttgaaattttcaattaagccgaccaaaggcaaagtg 303
Query: 181 cacagtaactatagagaaatctgcagctccagaaagatctggaagaaatgaagaaggaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cacagtaactatagagaaatctgcagctccagaaagatctggaagaaatgaagaaggaca 243
Query: 241 aaatgggggaaagtgggggggagacgcaaatgatctcccgaa 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaatgggggaaagtgggggggagacgcaaatgatctcccgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
