Query= MSMg01no164_b20.b1 MSMg01no164_b20.b1 CHROMAT_FILE:
MSMg01no164_b20.b1 PHD_FILE: MSMg01no164_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:52 2005
(658 letters)
>mm_chr1_150947689_150948746
Length = 1058
Score = 1210 bits (626), Expect = 0.0
Identities = 647/654 (98%)
Strand = Plus / Minus
Query: 5 gaattcttcaatgtttactctttagggatatgtgcttatttcaatttcaatttgagtttg 64
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 858 gaattcttcaatgtttactctttaaggatatgtgcttatttcaatttcaatttgagtttg 799
Query: 65 ttaaactgagtaaaataaaaacttagttcttcagttggccagacttacacatgacagtac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ttaaactgagtaaaataaaaacttagttcttcagttggccagacttacacatgacagtac 739
Query: 125 tcctctggccacttcatatgcacattggcatgggtacatctacattcacttgcatattat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcctctggccacttcatatgcacattggcatgggtacatctacattcacttgcatattat 679
Query: 185 tcacacatgtgtatacacaaaatataataacaataagtggaattaaaattgtaaggatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tcacacatgtgtatacacaaaatataataacaataagtggaattaaaattgtaaggatgt 619
Query: 245 tttaaagtttagagaagacaattttaatccttgggtgtgctaatatggataataaataaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tttaaagtttagagaagacaattttaatccttgggtgtgctaatatggataataaataaa 559
Query: 305 tttcttatcatgtataggaaattatgttaacataggtacagaaaagtaagtagactttca 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttcttatcaggtataggaaattatgttaacataggtacagaaaagtaagtagactttca 499
Query: 365 cagggaaaacacctatggtctaggaagtatgaatcagattccagcttgctttcttcatag 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cagggaaaacatctatggtctaggaagtatgaatcagattccagcttgctttcttcatag 439
Query: 425 actcagggcctgtctcaaaacacggaggtgtcaacctctgtcttcttgtacagtcttcat 484
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actcaggacctgtctcaaaacacggaggtgtcaacctctgtcttcttgtacagtcttcat 379
Query: 485 caatatatcagcagtgttacagacagtagaaatgctacacagaataaaagtatggacaca 544
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 378 caatatatcagtagtgttacagacagcagaaatgctacacagaataaaagtatggacaca 319
Query: 545 ataaagacaagaggtggtgacccaaggcatctacagataggatacaaaaagcaaaagaag 604
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 318 ataaagacaagaggtggtgacccaaggcacctacagataggatacaaaaagcaaaagaag 259
Query: 605 agatttagtagaaacattaaaaaccacaacatataaattatgggaacattacat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agatttagtagaaacattaaaaaccacaacatataaattatgggaacattacat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_b20.g1 MSMg01no164_b20.g1 CHROMAT_FILE:
MSMg01no164_b20.g1 PHD_FILE: MSMg01no164_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:52 2005
(649 letters)
>mm_chr1_150890096_150891142
Length = 1047
Score = 1135 bits (587), Expect = 0.0
Identities = 635/651 (97%), Gaps = 6/651 (0%)
Strand = Plus / Plus
Query: 1 aaacttcagaataatctatatcattaattctccttgaaattaaacacagacagtaaaagg 60
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 201 aaacttcagaataatctatatcattaattctccttgaaattgaacacaga-agtaaaagg 259
Query: 61 aaataattgaattttaagctggaagtatgtaaacaggctgtcatagaacatacttgcaat 120
|||||||||||||| ||||| ||||||||||||||||||||||||||||||| | |||||
Sbjct: 260 aaataattgaatttaaagctagaagtatgtaaacaggctgtcatagaacataatggcaat 319
Query: 121 gacagcacttgggaaacgaaggctggaggagtaagagtcaaatgttttttctcagatact 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 320 gacagcacttgggaaacgaaggctggaggagtaagagtcaaattttttttctcagatact 379
Query: 181 tggtaaattcaaggccagcatggagtatagaggctgtcttgtaaaatcatcaacaaacat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggtaaattcaaggccagcatggagtatagaggctgtcttgtaaaatcatcaacaaaca- 438
Query: 241 ttttttaatgagctaatatttatatgtcatatatat-tcactgctttcattttctccaca 299
||||||||||||||||||||||||||| |||||||| | |||| ||||||||||||||||
Sbjct: 439 ttttttaatgagctaatatttatatgttatatatatgt-actgttttcattttctccaca 497
Query: 300 aattgagagggatatttttgacatcatatttattaattccagaggagagttaatacactg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aattgagagggatatttttgacatcatatttattaattccagaggagagttaatacactg 557
Query: 360 aatcttgataatttttgttccctgctatctccaaatcctggcctttttaaaaattatata 419
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 558 aatcttgataatttttgttccctgctatctccaaatcctggccttttaaaaaattatata 617
Query: 420 taaacaggttagttgcccaaagccaggaattgtgtgtggtgtgtttgtgtgtgtgcacat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 taaacaggttagttgcccaaagccaggaattgtgtgtggtgtgtttgtgtgtgtgcacat 677
Query: 480 gtgtgtgtatgtgtgttgtcattttcacttttctttctaattacaatggaattacttttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtgtgtgtatgtgtgttgtcattttcacttttctttctaattacaatggaattacttttg 737
Query: 540 tttctcctattttattagcagatctcttggtgttgcccttattcagttcttgactatcca 599
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 738 tttctcctattttattagcagatctcttggtgttgtccttattcagttcttgactatcca 797
Query: 600 gttactgtttt-gggatattatgggtggagcttcactgacatttttaggag 649
||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 798 gttactgtttttggg-tattatgggtggagcttcactgacatttttaggag 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1047
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1037
Effective search space: 662643
Effective search space used: 662643
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
