Query= MSMg01no164_c13.b1 MSMg01no164_c13.b1 CHROMAT_FILE:
MSMg01no164_c13.b1 PHD_FILE: MSMg01no164_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:55 2005
(238 letters)
>mm_chr1_40092539_40093176
Length = 638
Score = 453 bits (234), Expect = e-132
Identities = 234/234 (100%)
Strand = Plus / Minus
Query: 1 gaccaacacttaaaatatatgtgcacgaatcatgcttatcgtcaacaaagggatttatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaccaacacttaaaatatatgtgcacgaatcatgcttatcgtcaacaaagggatttatca 375
Query: 61 gccacatacaagatgctgtactcacctagatcgtgattcacatacatcgaaaacgaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gccacatacaagatgctgtactcacctagatcgtgattcacatacatcgaaaacgaaaca 315
Query: 121 cacacaaacactcctaagaacacatcgcttgatgaaatctttacttttgttaggtatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cacacaaacactcctaagaacacatcgcttgatgaaatctttacttttgttaggtatggg 255
Query: 181 tgcagttatttggtgtatttatttatgattaggattgtctaggggttgctttga 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgcagttatttggtgtatttatttatgattaggattgtctaggggttgctttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no164_c13.g1 MSMg01no164_c13.g1 CHROMAT_FILE:
MSMg01no164_c13.g1 PHD_FILE: MSMg01no164_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:56 2005
(282 letters)
>mm_chr1_39989426_39990109
Length = 684
Score = 503 bits (260), Expect = e-147
Identities = 278/284 (97%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 ttgcctcctttatttctctttac-cagacttggctttccagggatgcgtaggactaccaa 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgcctcctttatttctctttacacagacttggctttccagggatgcgtaggactaccaa 260
Query: 60 agactgcctgaattaatatcggctgaccctgctgtgtggcaggcgactagctaatatgca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agactgcctgaattaatatcggctgaccctgctgtgtggcaggcgactagctaatatgca 320
Query: 120 gtcttcctgtgtggctcctcaggcgtggggccgagtcagcggagactgtcagcgacagtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcttcctgtgtggctcctcaggcgtggggccgagtcagcggagactgtcagcgacagtt 380
Query: 180 gagtctgtgtcccctccaaggagaagaggaagccacttctt-cagaagcctctaacgtac 238
||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 381 gagtctgtgtcccctccaaggagaagaggaagccacttctttctgaagcctctaaagtac 440
Query: 239 ctttcactgataaggtgggacacctgagactgagggttcacata 282
|||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 441 ctttcactgagaaggtgggacacttgagactgagggttcacata 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 684
Length adjustment: 9
Effective length of query: 273
Effective length of database: 675
Effective search space: 184275
Effective search space used: 184275
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
