Query= MSMg01no164_m15.b1 MSMg01no164_m15.b1 CHROMAT_FILE:
MSMg01no164_m15.b1 PHD_FILE: MSMg01no164_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:44 2005
(287 letters)
>mm_chr1_76315779_76316464
Length = 686
Score = 524 bits (271), Expect = e-153
Identities = 280/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 5 gaattcagagacccaccagctgctggaccagtcttaccagaaaagagatgtgatgtcctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gaattcagagacccaccagctgctggaccagtcttaccagaaaagagatgtgatgtcctt 427
Query: 65 attgtctgatgatcactattcaaagcacagtggaggctttctcttcattcaggggcaaaa 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 attgtctgatgatcact-ttcaaagcacagtggaggctttctcttcattcaggggcaaaa 368
Query: 125 aataataccctccctcccaccatcgggttccactcaaccatcaaagatagaatttttcca 184
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 367 agtaataccctccctcccaccatcgggttccactcaaccatcaaagatagagtttttcca 308
Query: 185 ttgggctcagtgtttctggtattacagtcagctcttatctgtctgttccccacccgcaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttgggctcagtgtttctggtattacagtcagctcttatctgtctgttccccacccgcaga 248
Query: 245 ttcaattgagagactgaacatactggggggaagccatcatata 287
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttcaattgagagactgaacatactggggggaagccatcatata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no164_m15.g1 MSMg01no164_m15.g1 CHROMAT_FILE:
MSMg01no164_m15.g1 PHD_FILE: MSMg01no164_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:44 2005
(283 letters)
>mm_chr1_76140419_76141103
Length = 685
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%), Gaps = 2/285 (0%)
Strand = Plus / Plus
Query: 1 acttcagaaacgtgttcctgctttctttgc-tatgcaaaggatgcatctaactagttggg 59
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 201 acttcagaaacgtgttcctgctttctttgcatatgcaaaggacgcatctaactagttggg 260
Query: 60 gtagcctggacttttattacaaggaaaagagtgcagaaggattttaacaagccaattaca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagcctggacttttattacaaggaaaagagtgcagaaggattttaacaagccaattaca 320
Query: 120 gaaaaa-tcatagaagtatttggcaaaaataagtagataaatagcaggaagggcaacagt 178
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaaaatcatagaagtatttggcaaaaataagtagataaatagcaggaagggcaacagt 380
Query: 179 gaataactaaagtccccagcacaagactttcttaagcacttcagtgagaaagaaaaatag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaataactaaagtccccagcacaagactttcttaagcacttcagtgagaaagaaaaatag 440
Query: 239 ggaaacctgtgcataatcttctagctgagtctggttaagaaggaa 283
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaacctatgcataatcttctagctgagtctggttaagaaggaa 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 685
Length adjustment: 9
Effective length of query: 274
Effective length of database: 676
Effective search space: 185224
Effective search space used: 185224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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