XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAAT
TCCAGGACAGCCACGGCTATACAGAGAAACCCTGTCACAAAAAAAAAAAA
AAATCATTTCCATATAAGTTTTATATAACTATTGTCTTAACATATTTTAA
TTGACATATAGAAGATGTAAATTTTATTAAGTATCATGTGATATCCTAAT
TAAAGTTATAAATGTGATGTTAACATCTAAACAACAAAACAGAACTTCTC
CTACCTAAGCAAACTTTAGCATCCACTGATAACCCTTTCATTGTGCCCTC
CTCTCCAGTCTTAATATTTTCAGTCTTTGGGAACCAGTGTTCTATCCTCA
ATATCTTTCCAATTAACCCACAATAAAAAGAAAAGGAGCAGCTGTAATCT
CTCTCCATGTATTTTGATCTTCATAGTTTTTCTTTAAAAATAAGGATGCA
ATTTAATCAACACCTTAGGTTGTATGTTTTCACCTCTCTGCATCACTAAC
TTCTCTCTTCCAAAACTCTTAACCTCATGCCTATAGCAGAGTAGACTTTT
ATCTTGGAATCTTCTGCTGGGTTGGATTTACTACTTCATTGTCTTTTCTC
TTCAAACAAGATTAAAGTTTTCTAACCAGCCTCAGTATATATGACTCATT
TTATACCCCTTTCTTGATCTACACAGAGGCAGTTAGGAAATATCCTCTAA
GCAATAAATGACACACATTGATGAGCTATCTCTTA

NTTATTCCNNNNAAAGAGGTGAGCTGGGGCGCCTGGNGCTGAXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTTTGCCCGNAAGTTATCATTCA
TATATCTACCATTTACTCCCCACCTACCTTCGATCTATCCACTTTTGAAT
TATCCTATCATCCATCATCTATGCCTTCTTTCCCTCTATAATTTGTACAA
GTTTGACTTCTTTTTAAATTTTTTTGGAGAGCTTGATATGAAATCTAACA
GCCAATAACTTATATATAAAATGAATTTAAAATTTGAGTTTTAATTTTCA
TTAGCAAACTTTTTCACATTTTTGTTATTCTAGACTATTGGCAAACATTG
ATTTAAAAAATGATAAGAGATACACACATTATTATTTTCTGTTAAAGGAA
TTGAACTTCATTAATTTTTTTAGCATGGCTTCTTAGTGTTCTGCTCTTGT
TCGGGATCCTACACCGAGATTCTGTAGGAACATTTCTTAGTTACAGTTTC
CATTGCTGAAACAAAAAAGACTGTGACAAAAATTCAAGTTGGGCAGAAAA
GGGTTTATTTGGCTAAAACTTGCCATATTGGATGGCTGTTGATCAAGGAA
GCCAGTCAGGACCGGAGCTCAAATAGAGCAGAATTCTAGAGGCAGAGGAC
ATGGGGGAGCACAGCTTACTGGCTTGCTTCCCATGGCTTGCTCAGCCTGA
TTTCTTACAGAACACAGGACCCCCATCCCAGGCACAGCATGACTTATAAT
GTGCTGGGTGCTCCGTCCCTGATAACTAATTAAGAAAATGTGCTATAACT
GTGAAAGCCATTTGTCAACTGAGCGCTCCTTTTCCTGGATGACCGTAACC
TTGTTTCCCGTTGACCCCAAACCAGCCCGTACGGTACCCACCCATTCCGA
AATTATGTACCTTGAAATCCCCAGTTAATGTGTCCTTCTAAAAACTAACT
AAACCCCCACTCTTTTATTTTTAACCCCCCATTATCCCCCCCCCTCACAC
TTTAGCCCCAACCCCCCCCAACATTTCAAACCCCCCCCCCCCCAACAACA
AACCCTTTCCGCCCCGCGCCGCCCCACCCACACATCCTCCAAACCCACAA
ACCCCACCGCATCTAACTGGGCGGTCCCTCTCTTAACCCCGGCGAACTCT
TGC

Query= MSMg01no165_m12.b1 MSMg01no165_m12.b1 CHROMAT_FILE:
MSMg01no165_m12.b1 PHD_FILE: MSMg01no165_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:04 2005
         (695 letters)



>mm_chr1_124583311_124584405
          Length = 1095

 Score = 1071 bits (554), Expect = 0.0
 Identities = 578/586 (98%)
 Strand = Plus / Minus

                                                                        
Query: 110  attgacatatagaagatgtaaattttattaagtatcatgtgatatcctaattaaagttat 169
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 attggcatatagaagatgtaaattttattaagtatcatgtgatatcctaattaaagttat 1036

                                                                        
Query: 170  aaatgtgatgttaacatctaaacaacaaaacagaacttctcctacctaagcaaactttag 229
            ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1035 aaatgtggtgttaacatctaaacaacaaaacagaacttctcctacttaagcaaactttag 976

                                                                        
Query: 230  catccactgataaccctttcattgtgccctcctctccagtcttaatattttcagtctttg 289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975  catccactgataaccctttcattgtgccctcctctccagtcttaatattttcagtctttg 916

                                                                        
Query: 290  ggaaccagtgttctatcctcaatatctttccaattaacccacaataaaaagaaaaggagc 349
            ||||||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||||
Sbjct: 915  ggaaccagtgttctatcctgaatatcttttcaattaactcacaattaaaagaaaaggagc 856

                                                                        
Query: 350  agctgtaatctctctccatgtattttgatcttcatagtttttctttaaaaataaggatgc 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855  agctgtaatctctctccatgtattttgatcttcatagtttttctttaaaaataaggatgc 796

                                                                        
Query: 410  aatttaatcaacaccttaggttgtatgttttcacctctctgcatcactaacttctctctt 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795  aatttaatcaacaccttaggttgtatgttttcacctctctgcatcactaacttctctctt 736

                                                                        
Query: 470  ccaaaactcttaacctcatgcctatagcagagtagacttttatcttggaatcttctgctg 529
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 735  ccaaaactcttaacctcatgcctatagcagtgtagacttttatcttggaatcttctgctg 676

                                                                        
Query: 530  ggttggatttactacttcattgtcttttctcttcaaacaagattaaagttttctaaccag 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675  ggttggatttactacttcattgtcttttctcttcaaacaagattaaagttttctaaccag 616

                                                                        
Query: 590  cctcagtatatatgactcattttatacccctttcttgatctacacagaggcagttaggaa 649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615  cctcagtatatatgactcattttatacccctttcttgatctacacagaggcagttaggaa 556

                                                          
Query: 650  atatcctctaagcaataaatgacacacattgatgagctatctctta 695
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555  atatcctctaagcaataaatgacacacattgatgagctatctctta 510


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space:   743225
Effective search space used:   743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)