XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACCA
CTATTACTGCTATTGTTGTGAACAAAGTATTCCCTGGAATGGCCACACCA
ATGTCCACCATGTCTTCTGGTAAAAGGCAGGCTATTTCCTCATCAGAACC
TGAATTTAGTGTCTTGAGAGATTAGCTGGTAAAGTCCTTCCATGCAAGCA
AGAAGACCTGAGGTTTGTCTTGCAGTACCCACACAAAATGTTGTTCATGA
GTGAATCTTCCTGCACAGCCACTGCTAGGAGAGCAGAGAGGAACCTCTGG
GGTGCAGCCAGGCAGTCTTGCCTAATTGTCAGGTTCCTGCTCAGTGAAAG
AATGTATCAAAAAATAAGGCAAAGGGGCTCAAACTCTCAGCCAGTCCCAC
AGCATTCCAGAGGAAGCACCACTCCCAGGCGCTCTAACACGCCCAAGATC
CCAGGGTCACACCAGAATCCCAGGGTCCCAGGGGAAGCTTGACTCCCAGG
AGCTCTGACACACCCAGGATCTGAGGATCAGAGAATCCTAAAATCACAGG
ATCACAGAGACAGCTGGACTCTGGGAAATTCTGACACAACTAGGATCACA
GGAAGGACAGGTTCCAGTCAGATATATTGAGGACAGGTAGCACTAATGAG
AACCAGATGGCTGGAAGCAAGCTTAAGAACAGAAACCAAGGTTACTTGGC
ATCATCAGAACCCAATCCTCCCAACATAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAATAGAATGGAATCCAAAGACCCAGGCATAAATCC
ACACAGCTATGGACATCTGTTTTTAATAAAGAAGCCAGAAATATACAATG
GGAACAAAGAAAGCATCTTCAACAAAACCTGATAGAAGAGAAAGCAGGGA
ACAGCCGTGAGTGCATTGGCGAATGGGAGGGCTTCCTGAATGGAACAATA
ACTCAGGCACCAAGATCAACAATTAACAAATAGGACCTCTTGATACTGAA
AAGCTTCTGTAAAGGAAAGGACATTGTCAAGATGATAAAATGATAGCACA
CGGAATGGGAAGAGATTTTTACCAACTCCACATCTGACAGCATACACTGA
TGAATCCAGGCAATTAATGAATTCAATTAATGAAGGGATGGGCTTCCGGA
CAGATTATCGAATCCTAGTTTTGAGCCCTAAATAAATACAGTGCACAGAA
AATGAACTCATCAGACACTTAACAATTTTCATGACCATGTAAAGGAGAAT
CAAACTCAAAGTCAGCTCAGGCTATGTTTCAAGTTCAAGGCCAGTCTTGG
CAATTTAGTGAAACTCTGTTTCAAAACTAACACATGAGAGCTGGCCGGGG
ACACAGCTCAATGGGAAAGCGCTTGTTAAGACTGGGTAAGGTGGGGGCTC
TACCATAGTACTGCTACAAATAAGAA

Query= MSMg01no165_p14.g1 MSMg01no165_p14.g1 CHROMAT_FILE:
MSMg01no165_p14.g1 PHD_FILE: MSMg01no165_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:20 2005
         (661 letters)



>mm_chr1_190639541_190640603
          Length = 1063

 Score = 1139 bits (589), Expect = 0.0
 Identities = 620/631 (98%), Gaps = 2/631 (0%)
 Strand = Plus / Minus

                                                                        
Query: 33   tccacacagctatggacatctgtttttaataaagaagccagaaatatacaatgggaacaa 92
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 tccacacagctatggacatctgtttttaataaagaagccagaaatatacaatgggaacaa 1004

                                                                        
Query: 93   agaaagcatcttcaacaaaacctgatagaagagaaagcagggaacagccgtgagtgcatt 152
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1003 agaaagcatcttcaacaaaacctgatagaggagaaagcagggaacagccgtgagtgcatt 944

                                                                        
Query: 153  ggcgaatgggagggcttcctgaatggaacaataactcaggcaccaagatcaacaattaac 212
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 943  ggcgaatgggagggcttcctgaatggaacaataactcgggcaccaagatcaacaattaac 884

                                                                        
Query: 213  aaataggacctcttgatactgaaaagcttctgtaaaggaaaggacattgtcaagatgata 272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883  aaataggacctcttgatactgaaaagcttctgtaaaggaaaggacattgtcaagatgata 824

                                                                        
Query: 273  aaatgatagcacacggaatgggaagagatttttaccaactccacatctgacagcatacac 332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823  aaatgatagcacacggaatgggaagagatttttaccaactccacatctgacagcatacac 764

                                                                        
Query: 333  tgatgaatccaggcaattaatgaattcaattaatgaagggatgggcttccggacagatta 392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  tgatgaatccaggcaattaatgaattcaattaatgaagggatgggcttccggacagatta 704

                                                                        
Query: 393  tcgaatcctagttttgagccctaaataaatacagtgcacagaaaatgaactcatcagaca 452
            ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 703  tcgaatcctagttttgagccctaaatacatacagtgcacagaaaatggactcatcagaca 644

                                                                        
Query: 453  cttaacaattttcatgaccatgtaaaggagaatc--aaactcaaagtcagctcaggctat 510
            ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 643  cttaacaattttcatgaccatgtaaaggagaatcataaactcaaagtcagctcaggctat 584

                                                                        
Query: 511  gtttcaagttcaaggccagtcttggcaatttagtgaaactctgtttcaaaactaacacat 570
            || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 583  gtctcaagttcaaggccagccttggcaatttagtgaaactctgtttcaaaactaacacat 524

                                                                        
Query: 571  gagagctggccggggacacagctcaatgggaaagcgcttgttaagactgggtaaggtggg 630
            |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 523  gagagctggctggggacacagctccatgggaaagcgcttgttaagactgggtaagttggg 464

                                           
Query: 631  ggctctaccatagtactgctacaaataagaa 661
            |||||||||||||||||||||||||||||||
Sbjct: 463  ggctctaccatagtactgctacaaataagaa 433


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1063
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1053
Effective search space:   685503
Effective search space used:   685503
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)