Query= MSMg01no166_c03.b1 MSMg01no166_c03.b1 CHROMAT_FILE:
MSMg01no166_c03.b1 PHD_FILE: MSMg01no166_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:32 2005
(609 letters)
>mm_chr1_195105818_195106826
Length = 1009
Score = 745 bits (385), Expect = 0.0
Identities = 432/448 (96%)
Strand = Plus / Minus
Query: 162 ttccctccatcgtgctgcttgaattttgctctattgtcccacagcaaatggccactgatt 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 ttccctccatcgtgctgcttgaattttgctctattgtcccacagcaaatggccactgatt 950
Query: 222 caacagtttcagactctgacgtggtggctctcactcctgcgggaaagaagtccaaccaca 281
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 949 caacagtttcagactctgacgtgttggctctcactcctgcgggaaagaagtccaaccaca 890
Query: 282 gcagcccaggtctcacagagttgacacccagatgctgcactgagtctcctctagaacaca 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gcagcccaggtctcacagagttgacacccagatgctgcactgagtctcctctagaacaca 830
Query: 342 gggtcttctgctatgttcatatggcgacagagagacacccattttcttgctagctgaagc 401
|||||||||| |||||||||||||| ||||||| || ||||||| |||||||||||||||
Sbjct: 829 gggtcttctgttatgttcatatggctacagagacacccccatttccttgctagctgaagc 770
Query: 402 tggggccgtactgcctttccatctgcaaagttagaggggagaagcccgtcactcgagacc 461
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 769 tggggccgtactgcctttccatctgcaaagttagagggaagaagcctgtcactcgagact 710
Query: 462 cttttcaacctttgattctcttcttcagaaaggcctgattcccacccatggacttacctg 521
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 709 cttttcagcctttgattctcttcttcagaaaggcctgattcccagccatgaacttacctg 650
Query: 522 gtgaatctggtccatctgagtgacatcttttccatganaccagttgtgccctatgacagg 581
||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 649 gtgaatctgatccgtctgagtgacatcttttccatgaaaccagttgtgccctatgacagt 590
Query: 582 cagatttttagagtcagctaagtagtta 609
||||||||||||||||||||||||||||
Sbjct: 589 cagatttttagagtcagctaagtagtta 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_c03.g1 MSMg01no166_c03.g1 CHROMAT_FILE:
MSMg01no166_c03.g1 PHD_FILE: MSMg01no166_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:32 2005
(371 letters)
>mm_chr1_194937469_194938239
Length = 771
Score = 646 bits (334), Expect = 0.0
Identities = 363/382 (95%), Gaps = 17/382 (4%)
Strand = Plus / Plus
Query: 1 tcttccttcaccagcacttgtaacaaatctatctttacttttgcttttctgtctttttca 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 tcttccttcaccagcacttgtaacaaatctatcattacttttgcttttctgtctttttca 260
Query: 61 gctctgtctgaagacatgtctgagacatgaagaatctagacatggagtcacagaacccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctctgtctgaagacatgtctgagacatgaagaatctagacatggagtcacagaacccta 320
Query: 121 agaccctgtctaataacacatacacactctctaatgccaggctgagatcagtggaagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaccctgtctaataacacatacacactctctaatgccaggctgagatcagtggaagagc 380
Query: 181 ctgcccagcacatgccaggctctgggttccatctctagcatatgccttttggtgtttcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcccagcacatgccaggctctgggttccatctctagcatatgccttttggtgtttcca 440
Query: 241 cttttctggttaaatacaaaactggatccaaagaaattacagaccaaaatgttcatcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttctggttaaatacaaaactggatccaaagaaattacagaccaaaatgttcatcatg 500
Query: 301 tccttggtaacttgcctgtttgttttgttttg-----gcaccccccc------tctctgt 349
|||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 501 tccttggtaacttgcctgtttgttttgttttgtttagggac------aaggtttctctgt 554
Query: 350 atagccctggctgttctgcaac 371
||||||||||||||||||||||
Sbjct: 555 atagccctggctgttctgcaac 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
