Query= MSMg01no166_c07.b1 MSMg01no166_c07.b1 CHROMAT_FILE:
MSMg01no166_c07.b1 PHD_FILE: MSMg01no166_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:33 2005
(222 letters)
>mm_chr1_155476245_155476865
Length = 621
Score = 389 bits (201), Expect = e-113
Identities = 216/221 (97%), Gaps = 1/221 (0%)
Strand = Plus / Plus
Query: 2 ccccacacccccactatttgtggatttagatgtcttcagtggaatgcagagtccacttgc 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cccca-acccccactatttgtggatttagatgtcttcagtggaatgcagagtccacttgc 260
Query: 62 aaggtgttatagtaccatcgagttcccaacatttaataaaatctctcaaaaatggtggcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggtgttatagtaccatcgagttcccaacatttaataaaatctctcaaaaatggtggcc 320
Query: 122 ctcactgctgctgttactgccactctgctgccataaagatcttgtgtgcaccttcacaag 181
||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 321 ctcactgctgctgttactgccactctgctgccataaagaccgtatgtgcaccttcacaag 380
Query: 182 aagaatatgaagtaaaagtattagagtggtgggggtggggt 222
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 aagaatatgaagtaaaagtattaaagtggtgggggtggggt 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 621
Length adjustment: 9
Effective length of query: 213
Effective length of database: 612
Effective search space: 130356
Effective search space used: 130356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no166_c07.g1 MSMg01no166_c07.g1 CHROMAT_FILE:
MSMg01no166_c07.g1 PHD_FILE: MSMg01no166_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:33 2005
(140 letters)
>mm_chr1_155585667_155586206
Length = 540
Score = 271 bits (140), Expect = 1e-77
Identities = 140/140 (100%)
Strand = Plus / Minus
Query: 1 tatgcagtaaggaaaacaatgttttgtcactttcaggatacagaattccatctcctaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tatgcagtaaggaaaacaatgttttgtcactttcaggatacagaattccatctcctaggg 281
Query: 61 ggcttctccagcagtaaggactgctctatgctctgtgaagtaaaaggtcgggaaaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ggcttctccagcagtaaggactgctctatgctctgtgaagtaaaaggtcgggaaaggaag 221
Query: 121 atgggagggagtgggaagga 140
||||||||||||||||||||
Sbjct: 220 atgggagggagtgggaagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 540
Length adjustment: 8
Effective length of query: 132
Effective length of database: 532
Effective search space: 70224
Effective search space used: 70224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
