ATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATTATGGCAGATTATAGGCAATGATTTGATCTTAAATTACCCT
TCTACCTTGCTTGTCTGTCCCTCTCCACTTCTTCTCTAGATCCTGGTCTG
TCTCTTACTTCCTTCTTTTGCCCAGCCCCACGTTCCTTCTCTTTAAGAAC
TGTCTCACACATCCTGCCCAGTTTTGAAAAGCCACAGATACTGTGGATAA
AAACTACATGACTGACCGCAGGGACTACCTACACATCCCAGAGACGTAAA
TGTTCATAAATAAGAAGAGCTGACACACAGTCTTTGATAAGCTATGTCAG
GCTCTGTGTCATTTAATTTAATCTCCATATCAAACCGTTAGCATAGGTAT
ATCTACTGCTACCACGATTTGTTTCTGCTCACAGCCTGCTGTCATTAAAT
ATATGGGACTTTCCCTTACCAACAGTAGTGCTTCATCTCTCCAGGCACAA
ACTGGATGTCCAACAAGACAATTCAATTTTGACATGAACTACCAGAAGTT
TAGCTTCCAAACTCAAAGCACCCTAAACTCTCCCTACTCTGCAGGCCAAT
CTCAATCTTACCACTGTAAGACTGGCCATCTCTAGAGTCTAGAGTAAAGG
ATCTCCCACAACTCATTTGTGAAGGTTCAATAACTTGCCAGAATTTCTCA
TAAAATTCACAAAATGCTTCATTTATCCGTCTCATTT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGC
AGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAG
ATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGA
AATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGAT
CCAGCAATACCTCTTCTGGGCATATATCCAGAAGATGTCCCAACTGGTAA
GAAGGACACATGCCCCCCTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATTTATGAAATTCCTAGCCAAATGTATGGACCTGGAGGGCATCATCCTGA
GCGATGTCATCCCCTCCCAATGGAACTCACCCAATATGTACTCACTGACT
AGTGGATTTTATCCTCTAACTTTAGGATTTCCAAGACATAAAAACCATGT
TTTTATCTCTTTGCCCCTCCAGAAGAATGATTATTGAATTGTCG

Query= MSMg01no166_c09.b1 MSMg01no166_c09.b1 CHROMAT_FILE:
MSMg01no166_c09.b1 PHD_FILE: MSMg01no166_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:33 2005
         (610 letters)



>mm_chr1_160361635_160362644
          Length = 1010

 Score = 1118 bits (578), Expect = 0.0
 Identities = 599/606 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattatggcagattataggcaatgatttgatcttaaattacccttctaccttgct 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattatgggagattataggcaatgatttgatcttaaattacccttctaccttgct 264

                                                                       
Query: 65  tgtctgtccctctccacttcttctctagatcctggtctgtctcttacttccttcttttgc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtctgtccctctccacttcttctctagatcctggtctgtctcttacttccttcttttgc 324

                                                                       
Query: 125 ccagccccacgttccttctctttaagaactgtctcacacatcctgcccagttttgaaaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccagccccacgttccttctctttaagaactgtctcacacatcctgcccagttttgaaaag 384

                                                                       
Query: 185 ccacagatactgtggataaaaactacatgactgaccgcagggactacctacacatcccag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccacagatactgtggataaaaactacatgactgaccgcagggactacctacacatcccag 444

                                                                       
Query: 245 agacgtaaatgttcataaataagaagagctgacacacagtctttgataagctatgtcagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agacgtaaatgttcataaataagaagagctgacacacagtctttgataagctatgtcagg 504

                                                                       
Query: 305 ctctgtgtcatttaatttaatctccatatcaaaccgttagcataggtatatctactgcta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctctgtgtcatttaatttaatctccatatcaaaccgttagcataggtatatctactgcta 564

                                                                       
Query: 365 ccacgatttgtttctgctcacagcctgctgtcattaaatatatgggactttcccttacca 424
             | ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 565 tgatgatgtgtttctgctcacagcctactgtcattaaatatatgggactttcccttacca 624

                                                                       
Query: 425 acagtagtgcttcatctctccaggcacaaactggatgtccaacaagacaattcaattttg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acagtagtgcttcatctctccaggcacaaactggatgtccaacaagacaattcaattttg 684

                                                                       
Query: 485 acatgaactaccagaagtttagcttccaaactcaaagcaccctaaactctccctactctg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acatgaactaccagaagtttagcttccaaactcaaagcaccctaaactctccctactctg 744

                                                                       
Query: 545 caggccaatctcaatcttaccactgtaagactggccatctctagagtctagagtaaagga 604
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 745 caggccaatctcaatcttaccaccgtaagactggccatctctagagtctagagtaaagga 804

                 
Query: 605 tctccc 610
           ||||||
Sbjct: 805 tctccc 810


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space:   600000
Effective search space used:   600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)