Query= MSMg01no166_d09.b1 MSMg01no166_d09.b1 CHROMAT_FILE:
MSMg01no166_d09.b1 PHD_FILE: MSMg01no166_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:38 2005
(319 letters)
>mm_chr1_178530004_178530723
Length = 720
Score = 528 bits (273), Expect = e-154
Identities = 304/315 (96%), Gaps = 3/315 (0%)
Strand = Plus / Plus
Query: 5 gaattctacttttgacatttatttttaatttcaattcattttttccaaattatgtagact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacttttgacatttatttttaatttcaattcattttttccaaattatgtagact 264
Query: 65 atactatttttattatgaggaacttaactagtttcatctcacatatggtcgatgtttgtt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atactatttttattgtgaggaacttaactagtttcatctcacatatggtcgatgtttgtt 324
Query: 125 ttaaaactgaatgagttttgggaaaaaaa-gatgtgttctctgagactgatggctcagga 183
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 325 ttaaaactgaatgagttttgggaaaaaaaagatgtgttctctgagactgatggctcagca 384
Query: 184 ggaaagaaaatgtacaattcttgcaccagacctgtgtttgcctcccagaattcatgttgg 243
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 ggaaagaaaatgtacaattcttgcaccagacctgtgtttgcctcccagaactcatgttga 444
Query: 244 ctggttcacagccacctgtggttccagctccaagtgatccaaagtttttattcatagata 303
|||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||
Sbjct: 445 ctggctcacagccacctgtggctccagctccaggtgatccaaagcttttattcatagata 504
Query: 304 cctgcacaggtgtgt 318
||||||| ||||||
Sbjct: 505 cctgcac--gtgtgt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_d09.g1 MSMg01no166_d09.g1 CHROMAT_FILE:
MSMg01no166_d09.g1 PHD_FILE: MSMg01no166_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:38 2005
(342 letters)
>mm_chr1_178613965_178614706
Length = 742
Score = 659 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Minus
Query: 1 cccatggaggacacatgaggtcatgtgtgccataagaaacagtggaactctagtcagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cccatggaggacacatgaggtcatgtgtgccataagaaacagtggaactctagtcagaga 482
Query: 61 accaaagtatggtcgatgaaaggagggagaaaagagtatcacgtgctctgaacttggcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accaaagtatggtcgatgaaaggagggagaaaagagtatcacgtgctctgaacttggcaa 422
Query: 121 acaaagaagagtggtggtatcaatgcgtggggaacagcgggacagtgctcaggcaacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaaagaagagtggtggtatcaatgcgtggggaacagcgggacagtgctcaggcaacctg 362
Query: 181 ggagcatcctcacttaggatgtgccaatggttgctcaatattcatgtctccagatctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggagcatcctcacttaggatgtgccaatggttgctcaatattcatgtctccagatctaga 302
Query: 241 atgccacttagtacaatagtcagaagtgtggaaataattaatgaggatcaacgttttagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgccacttagtacaatagtcagaagtgtggaaataattaatgaggatcaacgttttagt 242
Query: 301 tgcccagaagaactgctagctttccacctgtgattgctttt 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcccagaagaactgctagctttccacctgtgattgctttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
