Query= MSMg01no166_e19.b1 MSMg01no166_e19.b1 CHROMAT_FILE:
MSMg01no166_e19.b1 PHD_FILE: MSMg01no166_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:45 2005
(216 letters)
>mm_chr1_65416147_65416763
Length = 617
Score = 375 bits (194), Expect = e-108
Identities = 209/214 (97%), Gaps = 1/214 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaaaaaccctacgaagtttgggg-tttttttttcactgtacattataattctaa 62
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 417 ggaattcaaaaaccctaagaagtttggggttttttttttcactgtacattataattctaa 358
Query: 63 aaatgtataattattgctgaataaatgtactttgccttaaatatatataaagcagcaaat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aaatgtataattattgctgaataaatgtactttgccttaaatatatataaagcagcaaat 298
Query: 123 ggatatggagacagaaattcattgagaacaggatggtttagcaaaagatggacctaaact 182
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 297 ggatatggagacagaaattcattgagaacaggatggtttagtaaaagatggacctaaact 238
Query: 183 ctaaccagttttttacatcagcagaataaacagc 216
|||||||| |||||||||||| ||||||||||||
Sbjct: 237 ctaaccaggtttttacatcagtagaataaacagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 617
Length adjustment: 9
Effective length of query: 207
Effective length of database: 608
Effective search space: 125856
Effective search space used: 125856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no166_e19.g1 MSMg01no166_e19.g1 CHROMAT_FILE:
MSMg01no166_e19.g1 PHD_FILE: MSMg01no166_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:45 2005
(334 letters)
>mm_chr1_65324515_65325248
Length = 734
Score = 629 bits (325), Expect = 0.0
Identities = 331/333 (99%)
Strand = Plus / Plus
Query: 1 ctaagtcaatgcttaaggaaattaagaaatttttaattttatcttagcagttatatgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagtcaatgcttaaggaaattaagaaatttttaattttatcttagcagttatatgcta 260
Query: 61 tagtcagatacatagagcaaaatttaccatctaaaatttttaagttaaaattcagtggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtcagatacatagagcaaaatttaccatctaaaatttttaagttaaaattcagtggtg 320
Query: 121 tgaagcacactcttatcttcaaaatcccaggtaactaccatctgatttgtaagaatgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagcacactcttatcttcaaaatcccaggtaactaccatctgatttgtaagaatgtga 380
Query: 181 ttatccaagttacctcatataaatgattttgtgactctcctgtttcacttacatatttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatccaagttacctcatataaatgattttgtgactctcctgtttcacttacatatttta 440
Query: 241 tgttatgattagtgttacctgcttaatatttgatacatcctctattcaaaatactatatt 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttatgacaagtgttacctgcttaatatttgatacatcctctattcaaaatactatatt 500
Query: 301 aaaaggagttttggagctgggagatgggatagg 333
|||||||||||||||||||||||||||||||||
Sbjct: 501 aaaaggagttttggagctgggagatgggatagg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
