Query= MSMg01no167_p15.b1 MSMg01no167_p15.b1 CHROMAT_FILE:
MSMg01no167_p15.b1 PHD_FILE: MSMg01no167_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:53 2005
(541 letters)
>mm_chr1_127806209_127807149
Length = 941
Score = 949 bits (491), Expect = 0.0
Identities = 532/553 (96%), Gaps = 13/553 (2%)
Strand = Plus / Minus
Query: 1 gctcatcccctgagttcatcgtaaattgcaccgtgaacgttcaagacatgtgtcagaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gctcatcccctgagttcatcgtaaattgcaccgtgaacgttcaagacatgtgtcagaaag 781
Query: 61 aagtgatggagcaaagtgctggtaagatactctttccccctccgacccccatggaaggct 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 780 aagtgatggagcaaagtgctggtaagatactctttccccctccgacccccttggaaggct 721
Query: 121 gggaaaggagggtattaaattacaggaaaagatcctgactgatgtaacacacatgctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gggaaaggagggtattaaattacaggaaaagatcctgactgatgtaacacacatgctact 661
Query: 181 gtgtgttacacatgcacttgggcacacacacacacacacacacacac------------a 228
||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 660 gtgtgttacacatgcacttgggcacacacacacacacacacacacacacacacacacata 601
Query: 229 catatacactcactggttatttcttgatgtactttttacagttctggggaaatgaagagt 288
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 600 catatacactcactggttagcac-agatgtactttttacagttctggggaaatgaagagt 542
Query: 289 tggaagttactttaaactcattagggttaattgccagggcttcttcccaggggactcctg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggaagttactttaaactcattagggttaattgccagggcttcttcccaggggactcctg 482
Query: 349 agaagttattataaatcagtagctttcctttatttttatttttattttttatttacgcct 408
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 481 agaagttattataaatcagtagctttcctttatttttatctttattttttatttacacct 422
Query: 409 ttcaccttcctggactaaaaagctgatggggcagtgaaaacaatatatggataactgccc 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcaccttcctggactaaaaagctgatggggcagtgaaaacaatatatggataactgccc 362
Query: 469 cggctccagcagctcgacagtagcctgtgagcaatgtcagactgaaatatgaagctactt 528
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggctctagcagctcgacagtagcctgtgagcaatgtcagactgaaatatgaagctactt 302
Query: 529 gaagttcccagag 541
|||||||||||||
Sbjct: 301 gaagttcccagag 289
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_p15.g1 MSMg01no167_p15.g1 CHROMAT_FILE:
MSMg01no167_p15.g1 PHD_FILE: MSMg01no167_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:53 2005
(373 letters)
>mm_chr1_127668399_127669169
Length = 771
Score = 698 bits (361), Expect = 0.0
Identities = 368/371 (99%), Gaps = 2/371 (0%)
Strand = Plus / Plus
Query: 1 ctttatctactgcccagtgtagcgtgtgaccagagctctcctccatcaggacaaaattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttatctactgcccagtgtagcgtgtgaccagagctctcctccatcaggacaaaattga 260
Query: 61 tttcataatagaatctgatccttcccttgccagccaaatccacctcatctgaatcactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcataatagaatctgatccttcccttgccagccaaatccacctcatctgaatcactgc 320
Query: 121 ccccccccatgtgagataggagagaaaatggcttggctagaaggaagtgcttaaatgacc 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccccc--atgtgagataggagagaaaatggcttggctagaaggaagtgcttaaatgacc 378
Query: 181 cagccggtctttacttctcctaggggtcagtcccagaattgatctccacattggtgggca 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 379 cagccggtctttacttctcctaggggtcagtcccaggattgatctccacattggtgggca 438
Query: 241 cttgtgtctttaaaaagcattcagcttttacaagaaaagggtctttaactgttgagagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cttgtgtctttaaaaagcattcagcttttacaagaaaagggtctttaactgttgagagaa 498
Query: 301 ttttggaacactaagtcagaaacaggtatgtgtccctttacttggtgtgtgtgtgtgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttttggaacactaagtcagaaacaggtatgtgtccctttacttggtgtgtgtgtgtgtgt 558
Query: 361 gtgtgtgtgtg 371
|||||||||||
Sbjct: 559 gtgtgtgtgtg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 771
Length adjustment: 9
Effective length of query: 364
Effective length of database: 762
Effective search space: 277368
Effective search space used: 277368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
