Query= MSMg01no169_m10.b1 MSMg01no169_m10.b1 CHROMAT_FILE:
MSMg01no169_m10.b1 PHD_FILE: MSMg01no169_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:33 2005
(317 letters)
>mm_chr1_134861125_134861840
Length = 716
Score = 514 bits (266), Expect = e-150
Identities = 290/300 (96%), Gaps = 5/300 (1%)
Strand = Plus / Minus
Query: 13 tcattttttcttcttgctgcagactagctttctgtccatgctttggtacgcagaaggaaa 72
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 509 tcattttttcttcttgctgcagactagttttctgtccatgctttggtacgtggaaggaaa 450
Query: 73 gggcacctctagcatatctgaacctgaggctaaggagaagtcaagcctataatagaatct 132
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 449 gggcacctctagcatatctgaacctgaggctaaggagaagtcaagcctacaatagaatct 390
Query: 133 cttggctccgaatccagatttgtagggagggactctgattggcccggactgggtgggttg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cttggctccgaatccagatttgtagggagggactctgattggcccggactgggtgggttg 330
Query: 193 cccatggcttatctagtcagtgctgctgataagggtgtgcagtacacagggcccctgggt 252
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 329 cccatggcttatctagtcagtgctgctgataagggagtgcagtacacagggcccctgggt 270
Query: 253 gtcttgctgtaattgctatgta--ttttatgcaatttctgggaaggaagcagccggatca 310
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 269 gtcttgctgtaattgctatgtagc---tatgcaatttctgggaaggaagcagccggatca 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_m10.g1 MSMg01no169_m10.g1 CHROMAT_FILE:
MSMg01no169_m10.g1 PHD_FILE: MSMg01no169_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:33 2005
(287 letters)
>mm_chr1_134704075_134704761
Length = 687
Score = 516 bits (267), Expect = e-151
Identities = 282/287 (98%)
Strand = Plus / Plus
Query: 1 acagaggtataaaagactgaagcagagggcacacttcagggggcaccctggactggcaag 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 acagaggtataaaagactgaagcagagggcacacttcagggggcaagttggactggcaag 260
Query: 61 gagggaagtggctaagatccagggagcacacaggttgtgtgaaggacatgtgtgctctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagggaagtggctaagatccagggagcacacaggttgtgtgaaggacatgtgtgctctcc 320
Query: 121 tccaagcaggaggagtctttgacattgtcagaaagtgacacagttggttcaacctcagag 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 tccaagcaggaggagtctttgacattgtcaaaaagtgacacagttggttcaacctcagag 380
Query: 181 gtcagaacgttctgcaagagagagtagaagtttttatgatttgcgggtgtaggtccatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcagaacgttctgcaagagagagtagaagtttttatgatttgcgggtgtaggtccatca 440
Query: 241 tgacctcttcccttaaaccttctggttcctaattttctcattttgtt 287
||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tgacctcttcccttaaaccttctggttcccaattttctcattttgtt 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
