Query= MSMg01no173_a02.b1 MSMg01no173_a02.b1 CHROMAT_FILE:
MSMg01no173_a02.b1 PHD_FILE: MSMg01no173_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:35 2005
(593 letters)
>mm_chr1_92070700_92071691
Length = 992
Score = 1042 bits (539), Expect = 0.0
Identities = 575/589 (97%), Gaps = 5/589 (0%)
Strand = Plus / Minus
Query: 7 gaattcccaaaggtt--acccgtccagatgtgacggtgcaccccgggaccaggccccctc 64
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gaattcccaaaggttaaa---gtccagatgtgacggtgcaccccgggaccaggccccctc 736
Query: 65 gcactagcaaaacggagacatgatctgtttatattgatttttcacactaaagaggggaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gcactagcaaaacggagacatgatctgtttatattgatttttcacactaaagaggggaaa 676
Query: 125 caaacaaacaggtctttaactcaaaacctgttacgagttttctataggaataattttcaa 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 675 caaacaaacaggtctttaactcaaaacctgttaggagttttctataggaataattttcaa 616
Query: 185 aagctccattcttctctgagaagtgtgtttcggcaataatgctttctctgaaggctattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aagctccattcttctctgagaagtgtgtttcggcaataatgctttctctgaaggctattt 556
Query: 245 ttagtttcctacctgccgactgagaaaaaaatgccaagtgtgaaagtcaaatgcattgca 304
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 555 ttagtttcctacctgtcgactgagaaaaagatgccaagtgtgaaagtcaaatgcattgca 496
Query: 305 ggagcactctgggtgggtggaggggcgtgagtgcacactagaacagaagcaagactaagc 364
|||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 495 ggagcactgtgggtgggtggaggggcgtgaatgcatactagaacagaagcaagactaagc 436
Query: 365 tggagggggagggggtcacgcatcttcggaaagtgcggacccagagaggggagatgagcg 424
||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 435 tggagggggagggggtcacgcatctgcggaaagtgcggaccgggagaggggagatgagcg 376
Query: 425 cttagaattattatgcatgctccctccctctgggtctctgcagaaaattactaacattga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttagaattattatgcatgctccctccctctgggtctctgcagaaaattactaacattga 316
Query: 485 aagagaacaagagaacagaatgaaaagccaggcctgagctcatggctgtgactttgggga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagagaacaagagaacagaatgaaaagccaggcctgagctcatggctgtgactttgggga 256
Query: 545 gggctggctgtgctactgtttgtcctagaaggaactctgggctgtgaat 593
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gggctggctgtgctactgtttgtcctagaaggaactctgggctgtgaat 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 992
Length adjustment: 10
Effective length of query: 583
Effective length of database: 982
Effective search space: 572506
Effective search space used: 572506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_a02.g1 MSMg01no173_a02.g1 CHROMAT_FILE:
MSMg01no173_a02.g1 PHD_FILE: MSMg01no173_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:35 2005
(289 letters)
>mm_chr1_91949852_91950540
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Plus
Query: 1 aagtcttattcttaaaccccaggcctcagatggtgtgggctgtaactgacggtggtccag 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 aagtcttattcttaaaccccaggcctcagatggtgtgggctgtaactgagggtggtccag 260
Query: 61 caaggagcagtggggccactttgtgccaggcacagggcacaggcactgtacatgccagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggagcagtggggccactttgtgccaggcacagggcacaggcactgtacatgccagag 320
Query: 121 ccagcgtgcatgtgatgcagccacccctcgtaggggcctctctgggtttcagatgcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagcgtgcatgtgatgcagccacccctcgtaggggcctctctgggtttcagatgcctgt 380
Query: 181 gatctcctcaactcagtcccacagagtgtgccccattaaccccctcccccatttatagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatctcctcaactcagtcccacagagtgtgccccattaaccccctcccccatttatagac 440
Query: 241 gggggtcactgagggccagaagtgatctgagctacacagctccaaaatg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggggtcactgagggccagaagtgatctgagctacacagctccaaaatg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
