CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGCATAGTGCCACACTATTGGCTTATTCAAACATCAGCAGAAAAA
TTACATGTACGTGCAGGGTGTCAGAACTCTGTGAGTTGTTGACTCAGTTC
AGATAGCCCTGTGTGTCTTCACAGTCCTCTTTATCTTTAAGGTTAAGCTG
TTCCCAGGAATGCTTTAACTACGGGGCATACCCAGGTTTGTTTTTCTTTT
TTCTCAGCCCCAGGCAGCCTCTAGGCTCACAAATAACCAGCAATTTCTGA
GTACTTTATATGACTTAGAGGTCTTGAAATTTCATGTTTCTTTCACAGCG
ACCCACAGACAGTAGTGGCACACAGACTTCAAGGCCAATGCAAGGCAGTG
CCAAATGCCCTTCTAGCCCTCTACTCCGAGAGGATGATGTAGTTGCCAGG
AGCCATCAAGGAGAAGCTAATAACTAGCAGGTGATTTCCTGAAATGGTTT
CACCATGGACTATAAAACTACGATTGATGAGCCCTTCTAGGCAAGGCCAA
AGGGAGTACATTTTAGGAAATATTCATGCTGTTAATATGCTTTTTTTCCC
TGTTATTATTAAATATATATAACAATCACTAGGTACTAGCCCACCCTTTT
GAGTATATTTCCGCAGATCAAGATGTACTATCTTGTAATGATGCTATACA
GACAAATAGATTATTTN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATAAGCTCCCGCCCTAGTGCAGC
TCACCGTGTACAGGACATGGAGTCGACTGGCTTTGAGGCTCTGGAGAAGA
GGTGCCCATTGTGCAATCTATTCTGGCCTTAAACTGGAAAGCCCCAGCCT
CAGCCTCCTAATTACTGGCATAAACCATCATTCCTGAATAAAATGACGTT
ACTTTATATAATGTTCCTGTCCTTTAATGCTAGGTAAGTAATATAAATAA
TAGTGATATTGTGGCTAGCAGCATGAAACTCATATATAATTTCCTAGATG
AGTTTTTAGTATAAGTTTGCATATGATGATGCCACTTCACACAACAGCTG
ATCCTGTATCTTCTGTTTTCCTTCTCAGTGGTCTTTCTCAAGCTTTATGG
CTAGCTTATGTTCATTCCTTATATATTGTGGCTTTGATGTTTTAAACTTC
AAATACTTGCCTGTTATTTCTTCTGTGCCATTTGCTTTGTTCCCACAGTG
ACCACCTAGCTTGCTCTCTCTCTTCATATTTTCTGTGTCTTAGGGAGAAG
ACATCATCAGAAAGATCTTCTATCTGGTAAGATTTGGAAACAGAACAGGT
TCAGATAGTCTCTGAGCAGGAAGCTGTTTACGGCAGCCTGTTCTTGGCCT
GTGTTTTAGTATGA

Query= MSMg01no173_m06.g1 MSMg01no173_m06.g1 CHROMAT_FILE:
MSMg01no173_m06.g1 PHD_FILE: MSMg01no173_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:30 2005
         (628 letters)



>mm_chr1_66769203_66770230
          Length = 1028

 Score = 1207 bits (624), Expect = 0.0
 Identities = 627/628 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cataagctcccgccctagtgcagctcaccgtgtacaggacatggagtcgactggctttga 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 cataagctcccgccctagtgcagctcaccgtgtacaggacatggagttgactggctttga 260

                                                                       
Query: 61  ggctctggagaagaggtgcccattgtgcaatctattctggccttaaactggaaagcccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctctggagaagaggtgcccattgtgcaatctattctggccttaaactggaaagcccca 320

                                                                       
Query: 121 gcctcagcctcctaattactggcataaaccatcattcctgaataaaatgacgttacttta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctcagcctcctaattactggcataaaccatcattcctgaataaaatgacgttacttta 380

                                                                       
Query: 181 tataatgttcctgtcctttaatgctaggtaagtaatataaataatagtgatattgtggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataatgttcctgtcctttaatgctaggtaagtaatataaataatagtgatattgtggct 440

                                                                       
Query: 241 agcagcatgaaactcatatataatttcctagatgagtttttagtataagtttgcatatga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcagcatgaaactcatatataatttcctagatgagtttttagtataagtttgcatatga 500

                                                                       
Query: 301 tgatgccacttcacacaacagctgatcctgtatcttctgttttccttctcagtggtcttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgatgccacttcacacaacagctgatcctgtatcttctgttttccttctcagtggtcttt 560

                                                                       
Query: 361 ctcaagctttatggctagcttatgttcattccttatatattgtggctttgatgttttaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaagctttatggctagcttatgttcattccttatatattgtggctttgatgttttaaa 620

                                                                       
Query: 421 cttcaaatacttgcctgttatttcttctgtgccatttgctttgttcccacagtgaccacc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttcaaatacttgcctgttatttcttctgtgccatttgctttgttcccacagtgaccacc 680

                                                                       
Query: 481 tagcttgctctctctcttcatattttctgtgtcttagggagaagacatcatcagaaagat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagcttgctctctctcttcatattttctgtgtcttagggagaagacatcatcagaaagat 740

                                                                       
Query: 541 cttctatctggtaagatttggaaacagaacaggttcagatagtctctgagcaggaagctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttctatctggtaagatttggaaacagaacaggttcagatagtctctgagcaggaagctg 800

                                       
Query: 601 tttacggcagcctgttcttggcctgtgt 628
           ||||||||||||||||||||||||||||
Sbjct: 801 tttacggcagcctgttcttggcctgtgt 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)