Query= MSMg01no173_o15.b1 MSMg01no173_o15.b1 CHROMAT_FILE:
MSMg01no173_o15.b1 PHD_FILE: MSMg01no173_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:40 2005
(327 letters)
>mm_chr1_81728798_81729524
Length = 727
Score = 513 bits (265), Expect = e-150
Identities = 292/307 (95%), Gaps = 12/307 (3%)
Strand = Plus / Minus
Query: 31 ggcctttgacagagagatccacccaacttgattttaacattttgctgcctgacagtattc 90
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ggcctttgacagagagacccacccaacttgattttaacattttgctgcctgacagtattc 575
Query: 91 tcatcctgctg-aaaaaaccacaagcaaaacaaaaaacaaatcaaaacaacaacaacaac 149
||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 574 tcatcctgctgaaaaaaaccacaagcaaaacaaaaaacaaaacaaaacaa-aacaacaac 516
Query: 150 aacaacaaaaaaacaagtagtccaaaaatgtgctactaacttctgatcctacagtcactt 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aacaacaaaaaaacaagtagtccaaaaatgtgctactaacttctgatcctacagtcactt 456
Query: 210 ctaatcaccatctcaatttataaaatagagcatcgtagtcaagagagtaaacaaaatcag 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ctaatcaccatctcaatttataaaatagagcatcgtagtcaagagagtaaacaaaatcag 396
Query: 270 tatctgttgtgatagcaaatatcaaaccagtcctgtgc----------ttactttttgat 319
|||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 395 tatctgttgtgacagcaaatatcaaaccagtcctgtgccagtatggacttactttttgat 336
Query: 320 aaaaata 326
|||||||
Sbjct: 335 aaaaata 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_o15.g1 MSMg01no173_o15.g1 CHROMAT_FILE:
MSMg01no173_o15.g1 PHD_FILE: MSMg01no173_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:40 2005
(300 letters)
>mm_chr1_81624060_81624759
Length = 700
Score = 507 bits (262), Expect = e-148
Identities = 286/294 (97%)
Strand = Plus / Plus
Query: 5 tatgagaagtgaaatagattgtgtgactgggagactatttacacggcccactgggaagca 64
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 tatgagaagtgaaatagattgtgtgactgggagactattaacacggcccactgggaagca 264
Query: 65 ggtaggttggttattgggcacactcaaaatgtgtatttcagcttccagtttccagactgc 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtaggttggttattgggaacactcaaaatgtgtatttcagcttccagtttccagactgc 324
Query: 125 tatgttgtgatcatggaaaccatcacacttatctacaccaaaagaaaataggttgaactc 184
|||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 tatgctgtgatcatggaaaccatcatgcttatctacaccaaaagaaaataggttgaactc 384
Query: 185 agtgaaaacttgagtttctccttagatcaaccagggaactgaggtcagtaccaacaacta 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 agtgaaaacttgagtttctccttagatcaaccagggaactgaggtcagtactaacaacta 444
Query: 245 ctctgagatttgcagagaaggtaggaccattgcatggaatcccattctaactga 298
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 ctctgagatttgcagagaaggtaggaccattgcatggaatcccaacctaactga 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
