TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTGATCTCTCCAATACAGGGGGTGCTGTATTTTGTCAATTTTCTTTTTT
TTTTGCATATAAGTGCCTGCCCCTGTGACTCCTTTTTTGAGCTTGTTTAT
CTACTAGATTTTTGCATATTAAACCAACCTTGCATCCCTGAAATGAAGAC
CACTTGACCATGCTGAATGACGGCTTTGATGTGGCCTTTGATTACGTTTG
CAAGAACTTTATTCTTTTGCATAAACATTCACAACCGCGCTTGGCCTGAA
CCCCACTTCCCTGGTTATCTCCTTGCGTGCCGCACGCACCAGAGCAACTG
TGGTTTCTTTTTTTCCCCCCCCCCCCCGCTTTTCCTCGCTCTATTTTATG
TATCTACTCGACCCCCCCTGCAACCAAAACCTTTCCGGCCGCCTGGCACA
CCTTTGCCCCCACCCCATCTGACCTTGCCCTTGCTTGCCTTGCGACGCTT
CTAACGACTTCCCCCATTCCCCTCGCCCACATGCCACCCTCCCCCCCGCT
TCCCTCCTCTACCCTTCTTCACCCCCCTGTCCTGCTCCCCCACCTTTCCC
ACGCCATTCCCCCAACCCCCCCACACTCTCCCTCCCCCCCCCCTCATCCC
CCATCCCCCCCCTCTTCCCCCCCCCGCCCCCTTTCCTCGCCCCGCTGCCA
CCTCACCCTCGCCTTCCCCCCCCCCCGCGCCCCCCCTTTCTCCCCCTC

NCCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAGTATAAAGGAGACCTCA
CACATTTTTGCTACACTATTTGGTCTTAGAAAACTTTGCCAGGGGATATA
TATGTCCCTTTTGAAATAAACTAAAATAAATAAAATGCAACATCAGACCA
GGCTCAGTTTCCAAAGTTAAAAGAATGAGAAATAAGTTAAAAAAGAGACA
GAATTCAAGAGAAGCATGGTCTCTCTTTTGTCTAGAGATAGAGTACATTC
CTCATGATCGTCCTTAGGGAAAGAATGGCTCCAGGAAAGTTAACACGTGT
CAAGGCAGTGTGTTTAGTTTTTAGAGGGAAACCTTCATTTATTAGTACTT
TTTCTTTTCTATTTCATTAAATCACTCTTTTATGAAATACTCACAAAAAA
GTAAAATGAGTCTCTTAAATCAAATTTCGCTTGCACCTGCTATGTACAGG
ATAACTATACAGTAAATATAATGTCACTCAACTCAGGCACTATTGCTTCA
GTGGGCTAAAAAGTTAAATTAAGTCCTATTCTTGTTACATAAAATATTTT
TCTCTATAATGATGACAACAAAATTCCAGTTGTCTAAATACATTTTTTAA
AAAATTTAGGTGAAAATAACTGCAACTTTGTAGAACAAAAATATGAGTAT
TATTGAGGAAATCAT

Query= MSMg01no175_c11.g1 MSMg01no175_c11.g1 CHROMAT_FILE:
MSMg01no175_c11.g1 PHD_FILE: MSMg01no175_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:10 2005
         (636 letters)



>mm_chr1_27728729_27729764
          Length = 1036

 Score = 1199 bits (620), Expect = 0.0
 Identities = 632/636 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaagtataaaggagacctcacacatttttgctacactatttggtcttagaaaactttgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 aaaagtataaaggagacctcacacatttttgctacactatttggtcttagaaaactttgc 777

                                                                       
Query: 61  caggggatatatatgtcccttttgaaataaactaaaataaataaaatgcaacatcagacc 120
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 776 caggggatatatatgtcccttttggcataaactaaaataaataaaatgcaacatcagacc 717

                                                                       
Query: 121 aggctcagtttccaaagttaaaagaatgagaaataagttaaaaaagagacagaattcaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aggctcagtttccaaagttaaaagaatgagaaataagttaaaaaagagacagaattcaag 657

                                                                       
Query: 181 agaagcatggtctctcttttgtctagagatagagtacattcctcatgatcgtccttaggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 agaagcatggtctctcttttgtctagagatagagtacattcctcatgatcgtccttaggg 597

                                                                       
Query: 241 aaagaatggctccaggaaagttaacacgtgtcaaggcagtgtgtttagtttttagaggga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaagaatggctccaggaaagttaacacgtgtcaaggcagtgtgtttagtttttagaggga 537

                                                                       
Query: 301 aaccttcatttattagtactttttcttttctatttcattaaatcactcttttatgaaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aaccttcatttattagtactttttcttttctatttcattaaatcactcttttatgaaata 477

                                                                       
Query: 361 ctcacaaaaaagtaaaatgagtctcttaaatcaaatttcgcttgcacctgctatgtacag 420
           |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 476 ctcacaaaaaagtaaaatgagtctcttaaatcaaatttagcttgcgcctgctatgtacag 417

                                                                       
Query: 421 gataactatacagtaaatataatgtcactcaactcaggcactattgcttcagtgggctaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gataactatacagtaaatataatgtcactcaactcaggcactattgcttcagtgggctaa 357

                                                                       
Query: 481 aaagttaaattaagtcctattcttgttacataaaatatttttctctataatgatgacaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aaagttaaattaagtcctattcttgttacataaaatatttttctctataatgatgacaac 297

                                                                       
Query: 541 aaaattccagttgtctaaatacattttttaaaaaatttaggtgaaaataactgcaacttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aaaattccagttgtctaaatacattttttaaaaaatttaggtgaaaataactgcaacttt 237

                                               
Query: 601 gtagaacaaaaatatgagtattattgaggaaatcat 636
           ||||||||||||||||||||||||||||||||||||
Sbjct: 236 gtagaacaaaaatatgagtattattgaggaaatcat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)