Query= MSMg01no177_a08.b1 MSMg01no177_a08.b1 CHROMAT_FILE:
MSMg01no177_a08.b1 PHD_FILE: MSMg01no177_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:29 2005
(146 letters)
>mm_chr1_34486834_34487379
Length = 546
Score = 261 bits (135), Expect = 1e-74
Identities = 143/146 (97%)
Strand = Plus / Minus
Query: 1 aaggctctacatgaaaatctgggtgagtacagtcggnaacaccccaataccaccctcttg 60
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 346 aaggctctacatgaagatctgggtgagtacagtcgggaacaccccaataccaccctcttg 287
Query: 61 caatatgtaaatgatctcttagtggcagcagagaccatggaagaatgtcaacggagtact 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 caatatgtagatgatctcttagtggcagcagagaccatggaagaatgtcaacggagtact 227
Query: 121 gaggacctgctaatggcactggggca 146
||||||||||||||||||||||||||
Sbjct: 226 gaggacctgctaatggcactggggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space: 74244
Effective search space used: 74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no177_a08.g1 MSMg01no177_a08.g1 CHROMAT_FILE:
MSMg01no177_a08.g1 PHD_FILE: MSMg01no177_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:29 2005
(399 letters)
>mm_chr1_34318188_34318987
Length = 800
Score = 719 bits (372), Expect = 0.0
Identities = 387/392 (98%), Gaps = 3/392 (0%)
Strand = Plus / Plus
Query: 10 ttgttttgttttcctcaattgaggaaatatataactcacag-aatccctttggacctaat 68
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 210 ttgttttgttttcctcaattgaggaaatatataactca-aggaatccctttggacctaat 268
Query: 69 ctaaccacctaatcaaaactatgagttttacatgcactcatactttttaggatctcaaag 128
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctaaccacttaatcaaaactatgagttttacatgcactcatactttttaggatctcaaag 328
Query: 129 tggttgtctgaaatgaataatcagtttgggcagccaaatgtgcagcttatcaaaagaaaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tggttgtctgaaatgaataatcagtttgggcagccaaatgtgcagcttatcaaaagaaaa 388
Query: 189 aaataagtttaattgtgataaaattaaatataggttaggattcatattgctacaaaggag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aaataagtttaattgtgataaaattaaatataggttaggattcatattgctacaaaggag 448
Query: 249 cagagactgcttcttagtgaaaacattgagctattgatgggaaactcacgtgttctcccc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cagagactgcttcttagtgaaaacattgagctattgatgggaaactcacgtgttctcccc 508
Query: 309 c-aagggtgtctgtcacacggagtgcacagaggtcatgacttgaggcatggtttcatgca 367
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 509 ccaagggtgtctgtcacacggagtgcacagaggtcatggcttgaggcatggtttcatgca 568
Query: 368 cagccgaatgtaaccttttggatggaaatgtt 399
||||||||||||||||||||||||||||||||
Sbjct: 569 cagccgaatgtaaccttttggatggaaatgtt 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 800
Length adjustment: 9
Effective length of query: 390
Effective length of database: 791
Effective search space: 308490
Effective search space used: 308490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
