NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCTTCTGACTCTCTTAGAAGATTAGGTCCCTCTACTGAGG
TTTCCAAGCACTTGAGTTGAGAGGCACCCACTACATTGATGCTTTCCCTC
TTCTCTCCAACCCCTTCCCTGGAAGACTGTATAGTTGTGGAAATTGCAAT
TAATTAATTAATTTTCTATTTGCTTTGAGATAGAACCTCACTATGTAGCC
CATGCTGGCCTGGAACTCTCAAGGTGAAAATCAAGCTAGCCTAGAACTCA
CCTGCATCTGCCCACTCTTCCCTTCCCCTAACTCCCAGGGCTGAAGCTAC
AGGTGTGCGCTGTCATGCATGGCTTGAGTTCCAGGTGTGCACTGTCATAC
ATGGCTGAGGTTGCAGGTGTGCTGTCATGCATGGCTTGAGTTACAGGTGT
GCACTGTCATGCATGGCTGAGGTGGGGACTAGCTGTCTGCTCAGAGGTCA
GAGAATTGGGGAATCCTCTCAGCTCAATGTCCAGGGCCTATGAGAAGAAG
AAGGCAGTGGCTGCTGTCTGTGAAGGAAGGACCTGTGTCATCTATGCATC
TCTCTCTTTATCCATTCCTTAGGTGATGGGCACCTAAGGTTGAGGGTGCT
GGTTGCTCTGTCCCAGGACAGGTGCTCTGAGTCACATCCCTAGGAAGN

NNNAACGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGTGTCCTCATTCTGA
TAAGACTTTATTGAAAGCCTGGTTCATGTGGAACGTGTGAGGTATTTTCA
GCCACTTCAACTGTAGCAATCTCCCTTCTACACCTTGTGACACTCTCTTT
CTAACTTGTAACAGTTGCAGAAGGCATGAGTCATTGCAATTCCTAGACAT
AGCCTCCCCATAATATGCAAACCATTATCCCAAGGTGCCCCCCAGTGTTC
GTTTCCTCCTCTGGGTATCCAGGCTCATTACACACCAACTAAACGGGGGC
AGGTTGGTGCAATACAGGATCTTAGTTGATGGTGAGAGCACAAGAAACAA
ACCGCTTTCTCAGGAGACAGCTCCTTTAATTGGAGCAGAAGATAGGCCAT
TTATATCTTTGGGGAATGGGTAGAGGCTTTTGAGGGGAATAGACATCATT
GACCAGAGCCAGGGTTCTGGGAATGCCTTATTTGCATGAAGAGGAATCCC
AGGTGCTTGCCAAATGTGACCTTATAAGGAGAGAGGAAGTTGAACCTGTA
ACCTGGCTGCCAGGCTAAAGGGCCACCTCAGGGTTGGCAGAGGTTGGGAG
TGTAAGGCTACGTGGACCTGGACGTGCAGGCCCAGGGCAGGATAGGAACA
G

Query= MSMg01no177_i18.g1 MSMg01no177_i18.g1 CHROMAT_FILE:
MSMg01no177_i18.g1 PHD_FILE: MSMg01no177_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:08 2005
         (583 letters)



>mm_chr1_87343485_87344467
          Length = 983

 Score = 1027 bits (531), Expect = 0.0
 Identities = 570/583 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgtgtcctcattctgataagactttattgaaagcctggttcatgtggaacgtgtgagg 60
           |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 201 cttgtgtcctcagtctgataagactttattgaaagcctggttcatatggaacgtgtgaga 260

                                                                       
Query: 61  tattttcagccacttcaactgtagcaatctcccttctacaccttgtgacactctctttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattttcagccacttcaactgtagcaatctcccttctacaccttgtgacactctctttct 320

                                                                       
Query: 121 aacttgtaacagttgcagaaggcatgagtcattgcaattcctagacatagcctccccata 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacttgtaacagttgcagaaggtatgagtcattgcaattcctagacatagcctccccata 380

                                                                       
Query: 181 atatgcaaaccattatcccaaggtgccccccagtgttcgtttcctcctctgggtatccag 240
           ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 atatgcaaaccattatcacaaggtgccgcccagtgttcgtttcctcctctgggtatccag 440

                                                                       
Query: 241 gctcattacacaccaactaaacgggggcaggttggtgcaatacaggatcttagttgatgg 300
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 441 gctcattacacaccaactaaatgggggcaggtaggtgcaatacaggatcttagttgatgg 500

                                                                       
Query: 301 tgagagcacaagaaacaaaccgctttctcaggagacagctcctttaattggagcagaaga 360
           |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagagcacaagaaacaaacagccttctcaggagacagctcctttaattggagcagaaga 560

                                                                       
Query: 361 taggccatttatatctttggggaatgggtagaggcttttgaggggaatagacatcattga 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggccatttatatctttggggaatgggtagaggcttttgaggggaatagacatcattga 620

                                                                       
Query: 421 ccagagccagggttctgggaatgccttatttgcatgaagaggaatcccaggtgcttgcca 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 ccagagccagggttctgggaatgccttatttacatgaagaggaatcccaggtgcttgcca 680

                                                                       
Query: 481 aatgtgaccttataaggagagaggaagttgaacctgtaacctggctgccaggctaaaggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatgtgaccttataaggagagaggaagttgaacctgtaacctggctgccaggctaaaggg 740

                                                      
Query: 541 ccacctcagggttggcagaggttgggagtgtaaggctacgtgg 583
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcacctcagggttggcagaggttgggagtgtaaggctacgtgg 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)