Query= MSMg01no178_m08.b1 MSMg01no178_m08.b1 CHROMAT_FILE:
MSMg01no178_m08.b1 PHD_FILE: MSMg01no178_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:38 2005
(360 letters)
>mm_chr1_78291787_78292545
Length = 759
Score = 629 bits (325), Expect = 0.0
Identities = 346/353 (98%), Gaps = 1/353 (0%)
Strand = Plus / Minus
Query: 8 gaattccatggtgcacctctgagcacctgttgaattccatggtgcatctctgagcaccta 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaattccatggtgcatctctgagcacctgttgaattccatggtgcatctctgagcaccta 500
Query: 68 ctgaattccatggtgcatctctgagcacctactgaattccatggtgcatctctgagcacc 127
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 499 ctgaattccatgatgcatctctgagcacctactgaattccatgatgcatctctgagcacc 440
Query: 128 tgttgaattccatgatacttttctccaggctttttttgaagtcctcaatactctattcac 187
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Sbjct: 439 tgttgaattccacgatacttttctccaggc-ttttttgaagtcctcaatactctattcac 381
Query: 188 aaccttcattcttcattgcactgccttcttggctccagagacatttacaaagagcaattc 247
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 380 aaccttcattcttcattgcactgccttcttggttccagagacatttacaaagagcaattc 321
Query: 248 taatgcatagaagaagatcaactagctatgctacccatctggaatgcttaatgaccagtc 307
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 320 taatgcatagaagaagatcaactagctatgctacccatctggaatgcttaatgatcagtc 261
Query: 308 caaaactaatcacaggatatctcctttagaaatctagaaggccctggggtaga 360
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Sbjct: 260 caaaactaatcacaggatatctcctttagaaatctagaaggccctggggtaga 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 759
Length adjustment: 9
Effective length of query: 351
Effective length of database: 750
Effective search space: 263250
Effective search space used: 263250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_m08.g1 MSMg01no178_m08.g1 CHROMAT_FILE:
MSMg01no178_m08.g1 PHD_FILE: MSMg01no178_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:38 2005
(285 letters)
>mm_chr1_78150004_78150688
Length = 685
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 accatctcaggggtgaccaggaagacctttggcaaacctgcctttctcacagtcacccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 accatctcaggggtgaccaggaagacctttggcaaacctgcctttctcacagttacccac 260
Query: 61 gctcactcatcttgaacctttccctgaattgacagctccaccatttttactcaggataca 120
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Sbjct: 261 gctcactcatcttgaacctttccctgaattgacagctccaccatttttactcaggataca 320
Query: 121 agagaacactgtggttcact-gggacggctagagggtgaatttgaggttcacatctcact 179
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Sbjct: 321 agagagcactgtggttca-tcgggacggctagagggtgaatttgaggttcacatctcact 379
Query: 180 ttctttgatggcatgtttatttactggtacttactgtatatgttggagtaagtgggggca 239
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Sbjct: 380 ttctttgatggcatgtttatttactggtacttactgtatatgttggagtaagtgggggca 439
Query: 240 cacttccacaaatcatatatgtagaagttaaaaagcagcttata 283
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cacttccacaaatcatatatgtagaagttaaaaagcagcttata 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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