Query= MSMg01no181_d12.b1 MSMg01no181_d12.b1 CHROMAT_FILE:
MSMg01no181_d12.b1 PHD_FILE: MSMg01no181_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:38 2005
(219 letters)
>mm_chr1_78197757_78198375
Length = 619
Score = 406 bits (210), Expect = e-118
Identities = 216/218 (99%)
Strand = Plus / Plus
Query: 2 cgtcccagggtgaccgactgtacatcaccctgcagaggctggcagggcggtggagtaaga 61
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 202 cgtcccagggtgaccgactgtacatcaccctgcagaggctggcagggtggtggagtaaga 261
Query: 62 aggcacccggtgaggtggcgggctaggcctatcgttgagatgagtacagacctgtctctg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aggcacccggtgaggtggcgggctaggcctatcgttgagatgagtacagacctgtctctg 321
Query: 122 actcatttcggtgcccgccggcttcagggcagtggggtgacaccacccctctgccttcga 181
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actcttttcggtgcccgccggcttcagggcagtggggtgacaccacccctctgccttcga 381
Query: 182 tcctttcaacccacaggagattgtgagccaggtgattt 219
||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcctttcaacccacaggagattgtgagccaggtgattt 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no181_d12.g1 MSMg01no181_d12.g1 CHROMAT_FILE:
MSMg01no181_d12.g1 PHD_FILE: MSMg01no181_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:38 2005
(314 letters)
>mm_chr1_78292566_78293279
Length = 714
Score = 513 bits (265), Expect = e-150
Identities = 283/291 (97%), Gaps = 4/291 (1%)
Strand = Plus / Minus
Query: 5 gaattcagccagacccgaaagataaataccatacatttcacttaatgtcaagtcagaaaa 64
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 362 gaattcagccagacccgaaagataaataccacacatttcacttaatgtcaagccagaaaa 303
Query: 65 agttaaagccatcgtacagtggtaactaccaggcgagcctttggggcagagatgggttgc 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agttaaagccatcgtagagtggtaactaccaggcgagcctttggggcagagatgggttgc 243
Query: 125 aaagacaggaatcaaagcctgccaaatttcaagtagatgggtcagtcagactcatcaggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaagacaggaatcaaagcctgccaaatttcaagtagatgggtcagtcagactcatcaggt 183
Query: 185 aaaggcacctgctgccaagcttgatgggtcgagttcaagctctagacctgtacagtggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaaggcacctgctgccaagcttgatgggtcgagttcaagctctagacctgtacagtggaa 123
Query: 245 ggagagaaacacacacacacatacacacacacacactttcacacacacaca 295
||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 122 ggagagaaacacacacacacacacacacacacacac----acacacacaca 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 11
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
